Revana Report

PVT1 By gene

Chromosome: chr8

Position: 128 806 779 - 129 113 499

Width: 306 721

Strand: +

Gene Type: processed_transcript

Imprinting Status: no_imprinting

Cancer Gene: no

Role in Cancer: -

TAD region: 128 800 001 - 129 600 000

GeneHancer

GH08J127793 - (chr8:128805646-128810447)

Promoter/Enhancer - within gene TAD

SVs

sample_ID	position_category_SV	cis_activated_gene	n
ICGC_MB106	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE<->ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE	FALSE	1
ICGC_MB106	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE<->ON_SHARED_CHROM__OUTSIDE_TAD__HIGH_OF_BOTH	FALSE	2
ICGC_MB198	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE<->ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE	TRUE	1
ICGC_MB198	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE<->ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH	TRUE	1
ICGC_MB198	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH<->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	TRUE	4
ICGC_MB198	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH<->ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE	TRUE	4
ICGC_MB205	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH<->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	FALSE	1
ICGC_MB248	ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH<->ON_SHARED_CHROM__OUTSIDE_TAD__HIGH_OF_BOTH	TRUE	1
ICGC_MB248	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE<->ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH	TRUE	1
ICGC_MB248	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH<->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	TRUE	1
ICGC_MB248	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH<->ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE	TRUE	1
ICGC_MB50	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH<->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	FALSE	4
ICGC_MB89	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE<->ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH	FALSE	1
ICGC_MB89	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH<->ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE	FALSE	2
ICGC_MB94	ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH<->ON_SHARED_CHROM__OUTSIDE_TAD__HIGH_OF_BOTH	FALSE	1
ICGC_MB94	ON_SHARED_CHROM__OUTSIDE_TAD__HIGH_OF_BOTH<->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	FALSE	1
ICGC_MB94	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH<->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	FALSE	1

CNAs

sample_ID	position_category_CNA	cis_activated_gene	n
ICGC_MB106	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE->ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE	FALSE	1
ICGC_MB106	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE->ON_SHARED_CHROM__OUTSIDE_TAD__HIGH_OF_BOTH	FALSE	1
ICGC_MB106	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH->ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE	FALSE	1
ICGC_MB198	ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	TRUE	3
ICGC_MB198	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	TRUE	1
ICGC_MB198	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE->ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE	TRUE	4
ICGC_MB198	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH->ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE	TRUE	1
ICGC_MB205	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	FALSE	1
ICGC_MB248	ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	TRUE	1
ICGC_MB248	ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH->ON_SHARED_CHROM__OUTSIDE_TAD__HIGH_OF_BOTH	TRUE	1
ICGC_MB248	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	TRUE	1
ICGC_MB248	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE->ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE	TRUE	1
ICGC_MB248	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH->ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE	TRUE	1
ICGC_MB50	ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	FALSE	3
ICGC_MB50	ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH->ON_SHARED_CHROM__OUTSIDE_TAD__HIGH_OF_BOTH	FALSE	1
ICGC_MB50	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	FALSE	1
ICGC_MB62	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE->ON_SHARED_CHROM__OUTSIDE_TAD__HIGH_OF_BOTH	FALSE	1
ICGC_MB89	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE->ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE	FALSE	3
ICGC_MB89	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH->ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE	FALSE	1
ICGC_MB94	ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	FALSE	2
ICGC_MB94	ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH->ON_SHARED_CHROM__OUTSIDE_TAD__HIGH_OF_BOTH	FALSE	1
ICGC_MB94	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	FALSE	1

somatic SNVs

sample_ID	cis_activated_gene	n_within_genehancer
ICGC_MB118	FALSE	1

GH08J127799 - (chr8:128811309-128816439)

Promoter/Enhancer - within gene TAD

SVs

sample_ID	position_category_SV	cis_activated_gene	n
ICGC_MB106	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE<->ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE	FALSE	1
ICGC_MB106	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE<->ON_SHARED_CHROM__OUTSIDE_TAD__HIGH_OF_BOTH	FALSE	2
ICGC_MB198	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE<->ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE	TRUE	1
ICGC_MB198	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE<->ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH	TRUE	1
ICGC_MB198	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH<->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	TRUE	4
ICGC_MB198	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH<->ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE	TRUE	4
ICGC_MB205	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH<->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	FALSE	1
ICGC_MB248	ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH<->ON_SHARED_CHROM__OUTSIDE_TAD__HIGH_OF_BOTH	TRUE	1
ICGC_MB248	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE<->ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH	TRUE	1
ICGC_MB248	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH<->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	TRUE	1
ICGC_MB248	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH<->ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE	TRUE	1
ICGC_MB50	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH<->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	FALSE	4
ICGC_MB89	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE<->ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH	FALSE	1
ICGC_MB89	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH<->ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE	FALSE	2
ICGC_MB94	ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH<->ON_SHARED_CHROM__OUTSIDE_TAD__HIGH_OF_BOTH	FALSE	1
ICGC_MB94	ON_SHARED_CHROM__OUTSIDE_TAD__HIGH_OF_BOTH<->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	FALSE	1
ICGC_MB94	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH<->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	FALSE	1

CNAs

sample_ID	position_category_CNA	cis_activated_gene	n
ICGC_MB106	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE->ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE	FALSE	1
ICGC_MB106	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE->ON_SHARED_CHROM__OUTSIDE_TAD__HIGH_OF_BOTH	FALSE	1
ICGC_MB106	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH->ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE	FALSE	1
ICGC_MB198	ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	TRUE	3
ICGC_MB198	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	TRUE	1
ICGC_MB198	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE->ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE	TRUE	4
ICGC_MB198	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH->ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE	TRUE	1
ICGC_MB205	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	FALSE	1
ICGC_MB248	ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	TRUE	1
ICGC_MB248	ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH->ON_SHARED_CHROM__OUTSIDE_TAD__HIGH_OF_BOTH	TRUE	1
ICGC_MB248	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	TRUE	1
ICGC_MB248	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE->ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE	TRUE	1
ICGC_MB248	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH->ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE	TRUE	1
ICGC_MB50	ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	FALSE	3
ICGC_MB50	ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH->ON_SHARED_CHROM__OUTSIDE_TAD__HIGH_OF_BOTH	FALSE	1
ICGC_MB50	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	FALSE	1
ICGC_MB62	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE->ON_SHARED_CHROM__OUTSIDE_TAD__HIGH_OF_BOTH	FALSE	1
ICGC_MB89	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE->ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE	FALSE	3
ICGC_MB89	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH->ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE	FALSE	1
ICGC_MB94	ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	FALSE	2
ICGC_MB94	ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH->ON_SHARED_CHROM__OUTSIDE_TAD__HIGH_OF_BOTH	FALSE	1
ICGC_MB94	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	FALSE	1

GH08J127806 - (chr8:128818800-128825280)

Enhancer - within gene TAD

SVs

sample_ID	position_category_SV	cis_activated_gene	n
ICGC_MB106	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE<->ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE	FALSE	1
ICGC_MB106	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE<->ON_SHARED_CHROM__OUTSIDE_TAD__HIGH_OF_BOTH	FALSE	2
ICGC_MB198	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE<->ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE	TRUE	1
ICGC_MB198	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE<->ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH	TRUE	1
ICGC_MB198	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH<->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	TRUE	4
ICGC_MB198	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH<->ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE	TRUE	4
ICGC_MB205	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH<->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	FALSE	1
ICGC_MB248	ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH<->ON_SHARED_CHROM__OUTSIDE_TAD__HIGH_OF_BOTH	TRUE	1
ICGC_MB248	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE<->ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH	TRUE	1
ICGC_MB248	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH<->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	TRUE	1
ICGC_MB248	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH<->ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE	TRUE	1
ICGC_MB50	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH<->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	FALSE	4
ICGC_MB89	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE<->ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH	FALSE	1
ICGC_MB89	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH<->ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE	FALSE	2
ICGC_MB94	ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH<->ON_SHARED_CHROM__OUTSIDE_TAD__HIGH_OF_BOTH	FALSE	1
ICGC_MB94	ON_SHARED_CHROM__OUTSIDE_TAD__HIGH_OF_BOTH<->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	FALSE	1
ICGC_MB94	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH<->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	FALSE	1

CNAs

sample_ID	position_category_CNA	cis_activated_gene	n
ICGC_MB106	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE->ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE	FALSE	1
ICGC_MB106	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE->ON_SHARED_CHROM__OUTSIDE_TAD__HIGH_OF_BOTH	FALSE	1
ICGC_MB106	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH->ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE	FALSE	1
ICGC_MB198	ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	TRUE	3
ICGC_MB198	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	TRUE	1
ICGC_MB198	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE->ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE	TRUE	4
ICGC_MB198	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH->ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE	TRUE	1
ICGC_MB205	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	FALSE	1
ICGC_MB248	ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	TRUE	1
ICGC_MB248	ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH->ON_SHARED_CHROM__OUTSIDE_TAD__HIGH_OF_BOTH	TRUE	1
ICGC_MB248	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	TRUE	1
ICGC_MB248	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE->ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE	TRUE	1
ICGC_MB248	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH->ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE	TRUE	1
ICGC_MB50	ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	FALSE	3
ICGC_MB50	ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH->ON_SHARED_CHROM__OUTSIDE_TAD__HIGH_OF_BOTH	FALSE	1
ICGC_MB50	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	FALSE	1
ICGC_MB62	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE->ON_SHARED_CHROM__OUTSIDE_TAD__HIGH_OF_BOTH	FALSE	1
ICGC_MB89	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE->ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE	FALSE	3
ICGC_MB89	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH->ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE	FALSE	1
ICGC_MB94	ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	FALSE	2
ICGC_MB94	ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH->ON_SHARED_CHROM__OUTSIDE_TAD__HIGH_OF_BOTH	FALSE	1
ICGC_MB94	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	FALSE	1

somatic SNVs

sample_ID	cis_activated_gene	n_within_genehancer
ICGC_MB174	FALSE	1

GH08J127813 - (chr8:128825576-128827390)

Enhancer - within gene TAD

SVs

sample_ID	position_category_SV	cis_activated_gene	n
ICGC_MB106	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE<->ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE	FALSE	1
ICGC_MB106	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE<->ON_SHARED_CHROM__OUTSIDE_TAD__HIGH_OF_BOTH	FALSE	2
ICGC_MB198	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE<->ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE	TRUE	1
ICGC_MB198	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE<->ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH	TRUE	1
ICGC_MB198	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH<->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	TRUE	4
ICGC_MB198	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH<->ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE	TRUE	4
ICGC_MB205	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH<->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	FALSE	1
ICGC_MB248	ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH<->ON_SHARED_CHROM__OUTSIDE_TAD__HIGH_OF_BOTH	TRUE	1
ICGC_MB248	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE<->ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH	TRUE	1
ICGC_MB248	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH<->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	TRUE	1
ICGC_MB248	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH<->ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE	TRUE	1
ICGC_MB50	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH<->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	FALSE	4
ICGC_MB89	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE<->ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH	FALSE	1
ICGC_MB89	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH<->ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE	FALSE	2
ICGC_MB94	ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH<->ON_SHARED_CHROM__OUTSIDE_TAD__HIGH_OF_BOTH	FALSE	1
ICGC_MB94	ON_SHARED_CHROM__OUTSIDE_TAD__HIGH_OF_BOTH<->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	FALSE	1
ICGC_MB94	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH<->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	FALSE	1

CNAs

sample_ID	position_category_CNA	cis_activated_gene	n
ICGC_MB106	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE->ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE	FALSE	1
ICGC_MB106	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE->ON_SHARED_CHROM__OUTSIDE_TAD__HIGH_OF_BOTH	FALSE	1
ICGC_MB106	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH->ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE	FALSE	1
ICGC_MB198	ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	TRUE	3
ICGC_MB198	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	TRUE	1
ICGC_MB198	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE->ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE	TRUE	4
ICGC_MB198	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH->ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE	TRUE	1
ICGC_MB205	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	FALSE	1
ICGC_MB248	ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	TRUE	1
ICGC_MB248	ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH->ON_SHARED_CHROM__OUTSIDE_TAD__HIGH_OF_BOTH	TRUE	1
ICGC_MB248	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	TRUE	1
ICGC_MB248	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE->ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE	TRUE	1
ICGC_MB248	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH->ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE	TRUE	1
ICGC_MB50	ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	FALSE	3
ICGC_MB50	ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH->ON_SHARED_CHROM__OUTSIDE_TAD__HIGH_OF_BOTH	FALSE	1
ICGC_MB50	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	FALSE	1
ICGC_MB62	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE->ON_SHARED_CHROM__OUTSIDE_TAD__HIGH_OF_BOTH	FALSE	1
ICGC_MB89	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE->ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE	FALSE	3
ICGC_MB89	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH->ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE	FALSE	1
ICGC_MB94	ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	FALSE	2
ICGC_MB94	ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH->ON_SHARED_CHROM__OUTSIDE_TAD__HIGH_OF_BOTH	FALSE	1
ICGC_MB94	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	FALSE	1

GH08J127816 - (chr8:128828323-128833598)

Enhancer - within gene TAD

SVs

sample_ID	position_category_SV	cis_activated_gene	n
ICGC_MB106	ON_SHARED_CHROM__IN_SHARED_TAD__IN_OVERLAP<->ON_SHARED_CHROM__IN_SHARED_TAD__IN_OVERLAP	FALSE	1
ICGC_MB106	ON_SHARED_CHROM__IN_SHARED_TAD__IN_OVERLAP<->ON_SHARED_CHROM__OUTSIDE_TAD__HIGH_OF_BOTH	FALSE	2
ICGC_MB198	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE<->ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE	TRUE	1
ICGC_MB198	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE<->ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH	TRUE	1
ICGC_MB198	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH<->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	TRUE	4
ICGC_MB198	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH<->ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE	TRUE	3
ICGC_MB198	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH<->ON_SHARED_CHROM__IN_SHARED_TAD__IN_OVERLAP	TRUE	1
ICGC_MB205	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH<->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	FALSE	1
ICGC_MB248	ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH<->ON_SHARED_CHROM__OUTSIDE_TAD__HIGH_OF_BOTH	TRUE	1
ICGC_MB248	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE<->ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH	TRUE	1
ICGC_MB248	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH<->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	TRUE	1
ICGC_MB248	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH<->ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE	TRUE	1
ICGC_MB50	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH<->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	FALSE	4
ICGC_MB89	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE<->ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH	FALSE	1
ICGC_MB89	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH<->ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE	FALSE	2
ICGC_MB94	ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH<->ON_SHARED_CHROM__OUTSIDE_TAD__HIGH_OF_BOTH	FALSE	1
ICGC_MB94	ON_SHARED_CHROM__OUTSIDE_TAD__HIGH_OF_BOTH<->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	FALSE	1
ICGC_MB94	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH<->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	FALSE	1

CNAs

sample_ID	position_category_CNA	cis_activated_gene	n
ICGC_MB106	ON_SHARED_CHROM__IN_SHARED_TAD__IN_OVERLAP->ON_SHARED_CHROM__IN_SHARED_TAD__IN_OVERLAP	FALSE	1
ICGC_MB106	ON_SHARED_CHROM__IN_SHARED_TAD__IN_OVERLAP->ON_SHARED_CHROM__OUTSIDE_TAD__HIGH_OF_BOTH	FALSE	1
ICGC_MB106	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH->ON_SHARED_CHROM__IN_SHARED_TAD__IN_OVERLAP	FALSE	1
ICGC_MB198	ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	TRUE	3
ICGC_MB198	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	TRUE	1
ICGC_MB198	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE->ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE	TRUE	3
ICGC_MB198	ON_SHARED_CHROM__IN_SHARED_TAD__IN_OVERLAP->ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE	TRUE	1
ICGC_MB198	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH->ON_SHARED_CHROM__IN_SHARED_TAD__IN_OVERLAP	TRUE	1
ICGC_MB205	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	FALSE	1
ICGC_MB248	ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	TRUE	1
ICGC_MB248	ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH->ON_SHARED_CHROM__OUTSIDE_TAD__HIGH_OF_BOTH	TRUE	1
ICGC_MB248	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	TRUE	1
ICGC_MB248	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE->ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE	TRUE	1
ICGC_MB248	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH->ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE	TRUE	1
ICGC_MB50	ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	FALSE	3
ICGC_MB50	ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH->ON_SHARED_CHROM__OUTSIDE_TAD__HIGH_OF_BOTH	FALSE	1
ICGC_MB50	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	FALSE	1
ICGC_MB62	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE->ON_SHARED_CHROM__OUTSIDE_TAD__HIGH_OF_BOTH	FALSE	1
ICGC_MB89	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE->ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE	FALSE	3
ICGC_MB89	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH->ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE	FALSE	1
ICGC_MB94	ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	FALSE	2
ICGC_MB94	ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH->ON_SHARED_CHROM__OUTSIDE_TAD__HIGH_OF_BOTH	FALSE	1
ICGC_MB94	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	FALSE	1

somatic SNVs

sample_ID	cis_activated_gene	n_within_genehancer
ICGC_MB237	FALSE	1

GH08J127826 - (chr8:128838247-128841045)

Enhancer - within gene TAD

SVs

sample_ID	position_category_SV	cis_activated_gene	n
ICGC_MB106	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE<->ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE	FALSE	1
ICGC_MB106	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE<->ON_SHARED_CHROM__OUTSIDE_TAD__HIGH_OF_BOTH	FALSE	2
ICGC_MB198	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE<->ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE	TRUE	1
ICGC_MB198	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE<->ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH	TRUE	1
ICGC_MB198	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH<->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	TRUE	4
ICGC_MB198	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH<->ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE	TRUE	4
ICGC_MB205	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH<->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	FALSE	1
ICGC_MB248	ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH<->ON_SHARED_CHROM__OUTSIDE_TAD__HIGH_OF_BOTH	TRUE	1
ICGC_MB248	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE<->ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH	TRUE	1
ICGC_MB248	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH<->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	TRUE	1
ICGC_MB248	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH<->ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE	TRUE	1
ICGC_MB50	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH<->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	FALSE	4
ICGC_MB89	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE<->ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH	FALSE	1
ICGC_MB89	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH<->ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE	FALSE	2
ICGC_MB94	ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH<->ON_SHARED_CHROM__OUTSIDE_TAD__HIGH_OF_BOTH	FALSE	1
ICGC_MB94	ON_SHARED_CHROM__OUTSIDE_TAD__HIGH_OF_BOTH<->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	FALSE	1
ICGC_MB94	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH<->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	FALSE	1

CNAs

sample_ID	position_category_CNA	cis_activated_gene	n
ICGC_MB106	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE->ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE	FALSE	1
ICGC_MB106	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE->ON_SHARED_CHROM__OUTSIDE_TAD__HIGH_OF_BOTH	FALSE	1
ICGC_MB106	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH->ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE	FALSE	1
ICGC_MB198	ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	TRUE	3
ICGC_MB198	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	TRUE	1
ICGC_MB198	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE->ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE	TRUE	4
ICGC_MB198	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH->ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE	TRUE	1
ICGC_MB205	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	FALSE	1
ICGC_MB248	ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	TRUE	1
ICGC_MB248	ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH->ON_SHARED_CHROM__OUTSIDE_TAD__HIGH_OF_BOTH	TRUE	1
ICGC_MB248	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	TRUE	1
ICGC_MB248	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE->ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE	TRUE	1
ICGC_MB248	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH->ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE	TRUE	1
ICGC_MB50	ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	FALSE	3
ICGC_MB50	ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH->ON_SHARED_CHROM__OUTSIDE_TAD__HIGH_OF_BOTH	FALSE	1
ICGC_MB50	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	FALSE	1
ICGC_MB62	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE->ON_SHARED_CHROM__OUTSIDE_TAD__HIGH_OF_BOTH	FALSE	1
ICGC_MB89	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE->ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE	FALSE	3
ICGC_MB89	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH->ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE	FALSE	1
ICGC_MB94	ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	FALSE	2
ICGC_MB94	ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH->ON_SHARED_CHROM__OUTSIDE_TAD__HIGH_OF_BOTH	FALSE	1
ICGC_MB94	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	FALSE	1

GH08J127838 - (chr8:128851648-128853445)

Enhancer - within gene TAD

SVs

sample_ID	position_category_SV	cis_activated_gene	n
ICGC_MB106	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE<->ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE	FALSE	1
ICGC_MB106	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE<->ON_SHARED_CHROM__OUTSIDE_TAD__HIGH_OF_BOTH	FALSE	2
ICGC_MB198	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE<->ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE	TRUE	1
ICGC_MB198	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE<->ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH	TRUE	1
ICGC_MB198	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH<->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	TRUE	4
ICGC_MB198	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH<->ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE	TRUE	4
ICGC_MB205	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH<->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	FALSE	1
ICGC_MB248	ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH<->ON_SHARED_CHROM__OUTSIDE_TAD__HIGH_OF_BOTH	TRUE	1
ICGC_MB248	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE<->ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH	TRUE	1
ICGC_MB248	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH<->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	TRUE	1
ICGC_MB248	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH<->ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE	TRUE	1
ICGC_MB50	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH<->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	FALSE	4
ICGC_MB89	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE<->ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH	FALSE	1
ICGC_MB89	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH<->ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE	FALSE	2
ICGC_MB94	ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH<->ON_SHARED_CHROM__OUTSIDE_TAD__HIGH_OF_BOTH	FALSE	1
ICGC_MB94	ON_SHARED_CHROM__OUTSIDE_TAD__HIGH_OF_BOTH<->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	FALSE	1
ICGC_MB94	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH<->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	FALSE	1

CNAs

sample_ID	position_category_CNA	cis_activated_gene	n
ICGC_MB106	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE->ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE	FALSE	1
ICGC_MB106	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE->ON_SHARED_CHROM__OUTSIDE_TAD__HIGH_OF_BOTH	FALSE	1
ICGC_MB106	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH->ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE	FALSE	1
ICGC_MB198	ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	TRUE	3
ICGC_MB198	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	TRUE	1
ICGC_MB198	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE->ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE	TRUE	4
ICGC_MB198	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH->ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE	TRUE	1
ICGC_MB205	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	FALSE	1
ICGC_MB248	ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	TRUE	1
ICGC_MB248	ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH->ON_SHARED_CHROM__OUTSIDE_TAD__HIGH_OF_BOTH	TRUE	1
ICGC_MB248	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	TRUE	1
ICGC_MB248	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE->ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE	TRUE	1
ICGC_MB248	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH->ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE	TRUE	1
ICGC_MB50	ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	FALSE	3
ICGC_MB50	ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH->ON_SHARED_CHROM__OUTSIDE_TAD__HIGH_OF_BOTH	FALSE	1
ICGC_MB50	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	FALSE	1
ICGC_MB62	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE->ON_SHARED_CHROM__OUTSIDE_TAD__HIGH_OF_BOTH	FALSE	1
ICGC_MB89	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE->ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE	FALSE	3
ICGC_MB89	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH->ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE	FALSE	1
ICGC_MB94	ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	FALSE	2
ICGC_MB94	ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH->ON_SHARED_CHROM__OUTSIDE_TAD__HIGH_OF_BOTH	FALSE	1
ICGC_MB94	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	FALSE	1

somatic SNVs

sample_ID	cis_activated_gene	n_within_genehancer
ICGC_MB243	FALSE	1

GH08J127850 - (chr8:128862299-128869350)

Promoter/Enhancer - within gene TAD

SVs

sample_ID	position_category_SV	cis_activated_gene	n
ICGC_MB106	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE<->ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE	FALSE	1
ICGC_MB106	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE<->ON_SHARED_CHROM__OUTSIDE_TAD__HIGH_OF_BOTH	FALSE	2
ICGC_MB198	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE<->ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE	TRUE	1
ICGC_MB198	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE<->ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH	TRUE	1
ICGC_MB198	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH<->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	TRUE	4
ICGC_MB198	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH<->ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE	TRUE	4
ICGC_MB205	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH<->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	FALSE	1
ICGC_MB248	ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH<->ON_SHARED_CHROM__OUTSIDE_TAD__HIGH_OF_BOTH	TRUE	1
ICGC_MB248	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE<->ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH	TRUE	1
ICGC_MB248	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH<->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	TRUE	1
ICGC_MB248	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH<->ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE	TRUE	1
ICGC_MB50	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH<->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	FALSE	4
ICGC_MB89	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE<->ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH	FALSE	1
ICGC_MB89	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH<->ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE	FALSE	1
ICGC_MB89	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH<->ON_SHARED_CHROM__IN_SHARED_TAD__IN_OVERLAP	FALSE	1
ICGC_MB94	ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH<->ON_SHARED_CHROM__OUTSIDE_TAD__HIGH_OF_BOTH	FALSE	1
ICGC_MB94	ON_SHARED_CHROM__OUTSIDE_TAD__HIGH_OF_BOTH<->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	FALSE	1
ICGC_MB94	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH<->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	FALSE	1

CNAs

sample_ID	position_category_CNA	cis_activated_gene	n
ICGC_MB106	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE->ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE	FALSE	1
ICGC_MB106	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE->ON_SHARED_CHROM__OUTSIDE_TAD__HIGH_OF_BOTH	FALSE	1
ICGC_MB106	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH->ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE	FALSE	1
ICGC_MB198	ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	TRUE	3
ICGC_MB198	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	TRUE	1
ICGC_MB198	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE->ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE	TRUE	4
ICGC_MB198	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH->ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE	TRUE	1
ICGC_MB205	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	FALSE	1
ICGC_MB248	ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	TRUE	1
ICGC_MB248	ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH->ON_SHARED_CHROM__OUTSIDE_TAD__HIGH_OF_BOTH	TRUE	1
ICGC_MB248	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	TRUE	1
ICGC_MB248	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE->ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE	TRUE	1
ICGC_MB248	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH->ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE	TRUE	1
ICGC_MB50	ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	FALSE	3
ICGC_MB50	ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH->ON_SHARED_CHROM__OUTSIDE_TAD__HIGH_OF_BOTH	FALSE	1
ICGC_MB50	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	FALSE	1
ICGC_MB62	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE->ON_SHARED_CHROM__OUTSIDE_TAD__HIGH_OF_BOTH	FALSE	1
ICGC_MB89	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE->ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE	FALSE	2
ICGC_MB89	ON_SHARED_CHROM__IN_SHARED_TAD__IN_OVERLAP->ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE	FALSE	1
ICGC_MB89	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH->ON_SHARED_CHROM__IN_SHARED_TAD__IN_OVERLAP	FALSE	1
ICGC_MB94	ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	FALSE	2
ICGC_MB94	ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH->ON_SHARED_CHROM__OUTSIDE_TAD__HIGH_OF_BOTH	FALSE	1
ICGC_MB94	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	FALSE	1

GH08J127863 - (chr8:128875489-128885666)

Enhancer - within gene TAD

SVs

sample_ID	position_category_SV	cis_activated_gene	n
ICGC_MB106	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE<->ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE	FALSE	1
ICGC_MB106	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE<->ON_SHARED_CHROM__OUTSIDE_TAD__HIGH_OF_BOTH	FALSE	2
ICGC_MB198	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE<->ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE	TRUE	1
ICGC_MB198	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE<->ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH	TRUE	1
ICGC_MB198	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH<->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	TRUE	4
ICGC_MB198	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH<->ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE	TRUE	4
ICGC_MB205	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH<->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	FALSE	1
ICGC_MB248	ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH<->ON_SHARED_CHROM__OUTSIDE_TAD__HIGH_OF_BOTH	TRUE	1
ICGC_MB248	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE<->ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH	TRUE	1
ICGC_MB248	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH<->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	TRUE	1
ICGC_MB248	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH<->ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE	TRUE	1
ICGC_MB50	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH<->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	FALSE	4
ICGC_MB89	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE<->ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH	FALSE	1
ICGC_MB89	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH<->ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE	FALSE	2
ICGC_MB94	ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH<->ON_SHARED_CHROM__OUTSIDE_TAD__HIGH_OF_BOTH	FALSE	1
ICGC_MB94	ON_SHARED_CHROM__OUTSIDE_TAD__HIGH_OF_BOTH<->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	FALSE	1
ICGC_MB94	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH<->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	FALSE	1

CNAs

sample_ID	position_category_CNA	cis_activated_gene	n
ICGC_MB106	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE->ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE	FALSE	1
ICGC_MB106	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE->ON_SHARED_CHROM__OUTSIDE_TAD__HIGH_OF_BOTH	FALSE	1
ICGC_MB106	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH->ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE	FALSE	1
ICGC_MB198	ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	TRUE	3
ICGC_MB198	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	TRUE	1
ICGC_MB198	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE->ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE	TRUE	4
ICGC_MB198	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH->ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE	TRUE	1
ICGC_MB205	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	FALSE	1
ICGC_MB248	ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	TRUE	1
ICGC_MB248	ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH->ON_SHARED_CHROM__OUTSIDE_TAD__HIGH_OF_BOTH	TRUE	1
ICGC_MB248	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	TRUE	1
ICGC_MB248	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE->ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE	TRUE	1
ICGC_MB248	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH->ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE	TRUE	1
ICGC_MB50	ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	FALSE	3
ICGC_MB50	ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH->ON_SHARED_CHROM__OUTSIDE_TAD__HIGH_OF_BOTH	FALSE	1
ICGC_MB50	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	FALSE	1
ICGC_MB62	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE->ON_SHARED_CHROM__OUTSIDE_TAD__HIGH_OF_BOTH	FALSE	1
ICGC_MB89	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE->ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE	FALSE	3
ICGC_MB89	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH->ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE	FALSE	1
ICGC_MB94	ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	FALSE	2
ICGC_MB94	ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH->ON_SHARED_CHROM__OUTSIDE_TAD__HIGH_OF_BOTH	FALSE	1
ICGC_MB94	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	FALSE	1

somatic SNVs

sample_ID	cis_activated_gene	n_within_genehancer
ICGC_MB174	FALSE	1

GH08J127874 - (chr8:128886941-128892557)

Enhancer - within gene TAD

SVs

sample_ID	position_category_SV	cis_activated_gene	n
ICGC_MB106	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE<->ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE	FALSE	1
ICGC_MB106	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE<->ON_SHARED_CHROM__OUTSIDE_TAD__HIGH_OF_BOTH	FALSE	2
ICGC_MB198	ON_SHARED_CHROM__IN_SHARED_TAD__IN_OVERLAP<->ON_SHARED_CHROM__IN_SHARED_TAD__IN_OVERLAP	TRUE	1
ICGC_MB198	ON_SHARED_CHROM__IN_SHARED_TAD__IN_OVERLAP<->ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH	TRUE	1
ICGC_MB198	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH<->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	TRUE	4
ICGC_MB198	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH<->ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE	TRUE	3
ICGC_MB198	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH<->ON_SHARED_CHROM__IN_SHARED_TAD__IN_OVERLAP	TRUE	1
ICGC_MB205	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH<->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	FALSE	1
ICGC_MB248	ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH<->ON_SHARED_CHROM__OUTSIDE_TAD__HIGH_OF_BOTH	TRUE	1
ICGC_MB248	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE<->ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH	TRUE	1
ICGC_MB248	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH<->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	TRUE	1
ICGC_MB248	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH<->ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE	TRUE	1
ICGC_MB50	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH<->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	FALSE	4
ICGC_MB89	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE<->ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH	FALSE	1
ICGC_MB89	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH<->ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE	FALSE	2
ICGC_MB94	ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH<->ON_SHARED_CHROM__OUTSIDE_TAD__HIGH_OF_BOTH	FALSE	1
ICGC_MB94	ON_SHARED_CHROM__OUTSIDE_TAD__HIGH_OF_BOTH<->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	FALSE	1
ICGC_MB94	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH<->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	FALSE	1

CNAs

sample_ID	position_category_CNA	cis_activated_gene	n
ICGC_MB106	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE->ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE	FALSE	1
ICGC_MB106	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE->ON_SHARED_CHROM__OUTSIDE_TAD__HIGH_OF_BOTH	FALSE	1
ICGC_MB106	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH->ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE	FALSE	1
ICGC_MB198	ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	TRUE	3
ICGC_MB198	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	TRUE	1
ICGC_MB198	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE->ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE	TRUE	1
ICGC_MB198	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE->ON_SHARED_CHROM__IN_SHARED_TAD__IN_OVERLAP	TRUE	1
ICGC_MB198	ON_SHARED_CHROM__IN_SHARED_TAD__IN_OVERLAP->ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE	TRUE	1
ICGC_MB198	ON_SHARED_CHROM__IN_SHARED_TAD__IN_OVERLAP->ON_SHARED_CHROM__IN_SHARED_TAD__IN_OVERLAP	TRUE	1
ICGC_MB198	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH->ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE	TRUE	1
ICGC_MB205	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	FALSE	1
ICGC_MB248	ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	TRUE	1
ICGC_MB248	ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH->ON_SHARED_CHROM__OUTSIDE_TAD__HIGH_OF_BOTH	TRUE	1
ICGC_MB248	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	TRUE	1
ICGC_MB248	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE->ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE	TRUE	1
ICGC_MB248	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH->ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE	TRUE	1
ICGC_MB50	ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	FALSE	3
ICGC_MB50	ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH->ON_SHARED_CHROM__OUTSIDE_TAD__HIGH_OF_BOTH	FALSE	1
ICGC_MB50	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	FALSE	1
ICGC_MB62	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE->ON_SHARED_CHROM__OUTSIDE_TAD__HIGH_OF_BOTH	FALSE	1
ICGC_MB89	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE->ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE	FALSE	3
ICGC_MB89	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH->ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE	FALSE	1
ICGC_MB94	ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	FALSE	2
ICGC_MB94	ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH->ON_SHARED_CHROM__OUTSIDE_TAD__HIGH_OF_BOTH	FALSE	1
ICGC_MB94	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	FALSE	1

somatic SNVs

sample_ID	cis_activated_gene	n_within_genehancer
ICGC_MB40	FALSE	1

GH08J127881 - (chr8:128894153-128894806)

Enhancer - within gene TAD

SVs

sample_ID	position_category_SV	cis_activated_gene	n
ICGC_MB106	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE<->ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE	FALSE	1
ICGC_MB106	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE<->ON_SHARED_CHROM__OUTSIDE_TAD__HIGH_OF_BOTH	FALSE	2
ICGC_MB198	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE<->ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE	TRUE	1
ICGC_MB198	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE<->ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH	TRUE	1
ICGC_MB198	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH<->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	TRUE	4
ICGC_MB198	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH<->ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE	TRUE	4
ICGC_MB205	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH<->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	FALSE	1
ICGC_MB248	ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH<->ON_SHARED_CHROM__OUTSIDE_TAD__HIGH_OF_BOTH	TRUE	1
ICGC_MB248	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE<->ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH	TRUE	1
ICGC_MB248	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH<->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	TRUE	1
ICGC_MB248	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH<->ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE	TRUE	1
ICGC_MB50	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH<->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	FALSE	4
ICGC_MB89	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE<->ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH	FALSE	1
ICGC_MB89	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH<->ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE	FALSE	2
ICGC_MB94	ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH<->ON_SHARED_CHROM__OUTSIDE_TAD__HIGH_OF_BOTH	FALSE	1
ICGC_MB94	ON_SHARED_CHROM__OUTSIDE_TAD__HIGH_OF_BOTH<->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	FALSE	1
ICGC_MB94	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH<->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	FALSE	1

CNAs

sample_ID	position_category_CNA	cis_activated_gene	n
ICGC_MB106	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE->ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE	FALSE	1
ICGC_MB106	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE->ON_SHARED_CHROM__OUTSIDE_TAD__HIGH_OF_BOTH	FALSE	1
ICGC_MB106	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH->ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE	FALSE	1
ICGC_MB198	ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	TRUE	3
ICGC_MB198	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	TRUE	1
ICGC_MB198	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE->ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE	TRUE	4
ICGC_MB198	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH->ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE	TRUE	1
ICGC_MB205	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	FALSE	1
ICGC_MB248	ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	TRUE	1
ICGC_MB248	ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH->ON_SHARED_CHROM__OUTSIDE_TAD__HIGH_OF_BOTH	TRUE	1
ICGC_MB248	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	TRUE	1
ICGC_MB248	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE->ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE	TRUE	1
ICGC_MB248	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH->ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE	TRUE	1
ICGC_MB50	ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	FALSE	3
ICGC_MB50	ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH->ON_SHARED_CHROM__OUTSIDE_TAD__HIGH_OF_BOTH	FALSE	1
ICGC_MB50	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	FALSE	1
ICGC_MB62	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE->ON_SHARED_CHROM__OUTSIDE_TAD__HIGH_OF_BOTH	FALSE	1
ICGC_MB89	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE->ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE	FALSE	3
ICGC_MB89	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH->ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE	FALSE	1
ICGC_MB94	ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	FALSE	2
ICGC_MB94	ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH->ON_SHARED_CHROM__OUTSIDE_TAD__HIGH_OF_BOTH	FALSE	1
ICGC_MB94	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	FALSE	1

GH08J127882 - (chr8:128895047-128895246)

Enhancer - within gene TAD

SVs

sample_ID	position_category_SV	cis_activated_gene	n
ICGC_MB106	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE<->ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE	FALSE	1
ICGC_MB106	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE<->ON_SHARED_CHROM__OUTSIDE_TAD__HIGH_OF_BOTH	FALSE	2
ICGC_MB198	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE<->ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE	TRUE	1
ICGC_MB198	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE<->ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH	TRUE	1
ICGC_MB198	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH<->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	TRUE	4
ICGC_MB198	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH<->ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE	TRUE	4
ICGC_MB205	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH<->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	FALSE	1
ICGC_MB248	ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH<->ON_SHARED_CHROM__OUTSIDE_TAD__HIGH_OF_BOTH	TRUE	1
ICGC_MB248	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE<->ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH	TRUE	1
ICGC_MB248	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH<->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	TRUE	1
ICGC_MB248	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH<->ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE	TRUE	1
ICGC_MB50	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH<->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	FALSE	4
ICGC_MB89	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE<->ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH	FALSE	1
ICGC_MB89	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH<->ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE	FALSE	2
ICGC_MB94	ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH<->ON_SHARED_CHROM__OUTSIDE_TAD__HIGH_OF_BOTH	FALSE	1
ICGC_MB94	ON_SHARED_CHROM__OUTSIDE_TAD__HIGH_OF_BOTH<->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	FALSE	1
ICGC_MB94	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH<->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	FALSE	1

CNAs

sample_ID	position_category_CNA	cis_activated_gene	n
ICGC_MB106	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE->ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE	FALSE	1
ICGC_MB106	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE->ON_SHARED_CHROM__OUTSIDE_TAD__HIGH_OF_BOTH	FALSE	1
ICGC_MB106	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH->ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE	FALSE	1
ICGC_MB198	ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	TRUE	3
ICGC_MB198	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	TRUE	1
ICGC_MB198	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE->ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE	TRUE	4
ICGC_MB198	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH->ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE	TRUE	1
ICGC_MB205	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	FALSE	1
ICGC_MB248	ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	TRUE	1
ICGC_MB248	ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH->ON_SHARED_CHROM__OUTSIDE_TAD__HIGH_OF_BOTH	TRUE	1
ICGC_MB248	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	TRUE	1
ICGC_MB248	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE->ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE	TRUE	1
ICGC_MB248	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH->ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE	TRUE	1
ICGC_MB50	ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	FALSE	3
ICGC_MB50	ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH->ON_SHARED_CHROM__OUTSIDE_TAD__HIGH_OF_BOTH	FALSE	1
ICGC_MB50	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	FALSE	1
ICGC_MB62	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE->ON_SHARED_CHROM__OUTSIDE_TAD__HIGH_OF_BOTH	FALSE	1
ICGC_MB89	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE->ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE	FALSE	3
ICGC_MB89	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH->ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE	FALSE	1
ICGC_MB94	ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	FALSE	2
ICGC_MB94	ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH->ON_SHARED_CHROM__OUTSIDE_TAD__HIGH_OF_BOTH	FALSE	1
ICGC_MB94	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	FALSE	1

GH08J127888 - (chr8:128900605-128905498)

Promoter/Enhancer - within gene TAD

SVs

sample_ID	position_category_SV	cis_activated_gene	n
ICGC_MB106	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE<->ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE	FALSE	1
ICGC_MB106	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE<->ON_SHARED_CHROM__OUTSIDE_TAD__HIGH_OF_BOTH	FALSE	2
ICGC_MB198	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE<->ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE	TRUE	1
ICGC_MB198	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE<->ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH	TRUE	1
ICGC_MB198	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH<->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	TRUE	4
ICGC_MB198	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH<->ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE	TRUE	4
ICGC_MB205	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH<->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	FALSE	1
ICGC_MB248	ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH<->ON_SHARED_CHROM__OUTSIDE_TAD__HIGH_OF_BOTH	TRUE	1
ICGC_MB248	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE<->ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH	TRUE	1
ICGC_MB248	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH<->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	TRUE	1
ICGC_MB248	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH<->ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE	TRUE	1
ICGC_MB50	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH<->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	FALSE	4
ICGC_MB89	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE<->ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH	FALSE	1
ICGC_MB89	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH<->ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE	FALSE	2
ICGC_MB94	ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH<->ON_SHARED_CHROM__OUTSIDE_TAD__HIGH_OF_BOTH	FALSE	1
ICGC_MB94	ON_SHARED_CHROM__OUTSIDE_TAD__HIGH_OF_BOTH<->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	FALSE	1
ICGC_MB94	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH<->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	FALSE	1

CNAs

sample_ID	position_category_CNA	cis_activated_gene	n
ICGC_MB106	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE->ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE	FALSE	1
ICGC_MB106	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE->ON_SHARED_CHROM__OUTSIDE_TAD__HIGH_OF_BOTH	FALSE	1
ICGC_MB106	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH->ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE	FALSE	1
ICGC_MB198	ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	TRUE	3
ICGC_MB198	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	TRUE	1
ICGC_MB198	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE->ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE	TRUE	4
ICGC_MB198	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH->ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE	TRUE	1
ICGC_MB205	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	FALSE	1
ICGC_MB248	ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	TRUE	1
ICGC_MB248	ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH->ON_SHARED_CHROM__OUTSIDE_TAD__HIGH_OF_BOTH	TRUE	1
ICGC_MB248	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	TRUE	1
ICGC_MB248	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE->ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE	TRUE	1
ICGC_MB248	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH->ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE	TRUE	1
ICGC_MB50	ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	FALSE	3
ICGC_MB50	ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH->ON_SHARED_CHROM__OUTSIDE_TAD__HIGH_OF_BOTH	FALSE	1
ICGC_MB50	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	FALSE	1
ICGC_MB62	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE->ON_SHARED_CHROM__OUTSIDE_TAD__HIGH_OF_BOTH	FALSE	1
ICGC_MB89	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE->ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE	FALSE	3
ICGC_MB89	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH->ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE	FALSE	1
ICGC_MB94	ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	FALSE	2
ICGC_MB94	ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH->ON_SHARED_CHROM__OUTSIDE_TAD__HIGH_OF_BOTH	FALSE	1
ICGC_MB94	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	FALSE	1

GH08J127915 - (chr8:128927898-128933813)

Promoter/Enhancer - within gene TAD

SVs

sample_ID	position_category_SV	cis_activated_gene	n
ICGC_MB106	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE<->ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE	FALSE	1
ICGC_MB106	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE<->ON_SHARED_CHROM__OUTSIDE_TAD__HIGH_OF_BOTH	FALSE	2
ICGC_MB198	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE<->ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE	TRUE	1
ICGC_MB198	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE<->ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH	TRUE	1
ICGC_MB198	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH<->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	TRUE	4
ICGC_MB198	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH<->ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE	TRUE	4
ICGC_MB205	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH<->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	FALSE	1
ICGC_MB248	ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH<->ON_SHARED_CHROM__OUTSIDE_TAD__HIGH_OF_BOTH	TRUE	1
ICGC_MB248	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE<->ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH	TRUE	1
ICGC_MB248	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH<->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	TRUE	1
ICGC_MB248	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH<->ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE	TRUE	1
ICGC_MB50	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH<->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	FALSE	4
ICGC_MB89	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE<->ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH	FALSE	1
ICGC_MB89	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH<->ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE	FALSE	2
ICGC_MB94	ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH<->ON_SHARED_CHROM__OUTSIDE_TAD__HIGH_OF_BOTH	FALSE	1
ICGC_MB94	ON_SHARED_CHROM__OUTSIDE_TAD__HIGH_OF_BOTH<->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	FALSE	1
ICGC_MB94	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH<->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	FALSE	1

CNAs

sample_ID	position_category_CNA	cis_activated_gene	n
ICGC_MB106	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE->ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE	FALSE	1
ICGC_MB106	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE->ON_SHARED_CHROM__OUTSIDE_TAD__HIGH_OF_BOTH	FALSE	1
ICGC_MB106	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH->ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE	FALSE	1
ICGC_MB198	ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	TRUE	3
ICGC_MB198	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	TRUE	1
ICGC_MB198	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE->ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE	TRUE	4
ICGC_MB198	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH->ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE	TRUE	1
ICGC_MB205	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	FALSE	1
ICGC_MB248	ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	TRUE	1
ICGC_MB248	ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH->ON_SHARED_CHROM__OUTSIDE_TAD__HIGH_OF_BOTH	TRUE	1
ICGC_MB248	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	TRUE	1
ICGC_MB248	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE->ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE	TRUE	1
ICGC_MB248	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH->ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE	TRUE	1
ICGC_MB50	ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	FALSE	3
ICGC_MB50	ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH->ON_SHARED_CHROM__OUTSIDE_TAD__HIGH_OF_BOTH	FALSE	1
ICGC_MB50	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	FALSE	1
ICGC_MB62	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE->ON_SHARED_CHROM__OUTSIDE_TAD__HIGH_OF_BOTH	FALSE	1
ICGC_MB89	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE->ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE	FALSE	3
ICGC_MB89	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH->ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE	FALSE	1
ICGC_MB94	ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	FALSE	2
ICGC_MB94	ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH->ON_SHARED_CHROM__OUTSIDE_TAD__HIGH_OF_BOTH	FALSE	1
ICGC_MB94	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	FALSE	1

somatic SNVs

sample_ID	cis_activated_gene	n_within_genehancer
ICGC_MB46	FALSE	1

GH08J127923 - (chr8:128935511-128936592)

Enhancer - within gene TAD

SVs

sample_ID	position_category_SV	cis_activated_gene	n
ICGC_MB106	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE<->ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE	FALSE	1
ICGC_MB106	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE<->ON_SHARED_CHROM__OUTSIDE_TAD__HIGH_OF_BOTH	FALSE	2
ICGC_MB198	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE<->ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE	TRUE	1
ICGC_MB198	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE<->ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH	TRUE	1
ICGC_MB198	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH<->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	TRUE	4
ICGC_MB198	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH<->ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE	TRUE	4
ICGC_MB205	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH<->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	FALSE	1
ICGC_MB248	ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH<->ON_SHARED_CHROM__OUTSIDE_TAD__HIGH_OF_BOTH	TRUE	1
ICGC_MB248	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE<->ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH	TRUE	1
ICGC_MB248	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH<->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	TRUE	1
ICGC_MB248	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH<->ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE	TRUE	1
ICGC_MB50	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH<->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	FALSE	4
ICGC_MB89	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE<->ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH	FALSE	1
ICGC_MB89	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH<->ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE	FALSE	2
ICGC_MB94	ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH<->ON_SHARED_CHROM__OUTSIDE_TAD__HIGH_OF_BOTH	FALSE	1
ICGC_MB94	ON_SHARED_CHROM__OUTSIDE_TAD__HIGH_OF_BOTH<->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	FALSE	1
ICGC_MB94	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH<->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	FALSE	1

CNAs

sample_ID	position_category_CNA	cis_activated_gene	n
ICGC_MB106	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE->ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE	FALSE	1
ICGC_MB106	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE->ON_SHARED_CHROM__OUTSIDE_TAD__HIGH_OF_BOTH	FALSE	1
ICGC_MB106	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH->ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE	FALSE	1
ICGC_MB198	ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	TRUE	3
ICGC_MB198	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	TRUE	1
ICGC_MB198	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE->ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE	TRUE	4
ICGC_MB198	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH->ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE	TRUE	1
ICGC_MB205	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	FALSE	1
ICGC_MB248	ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	TRUE	1
ICGC_MB248	ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH->ON_SHARED_CHROM__OUTSIDE_TAD__HIGH_OF_BOTH	TRUE	1
ICGC_MB248	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	TRUE	1
ICGC_MB248	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE->ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE	TRUE	1
ICGC_MB248	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH->ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE	TRUE	1
ICGC_MB50	ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	FALSE	3
ICGC_MB50	ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH->ON_SHARED_CHROM__OUTSIDE_TAD__HIGH_OF_BOTH	FALSE	1
ICGC_MB50	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	FALSE	1
ICGC_MB62	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE->ON_SHARED_CHROM__OUTSIDE_TAD__HIGH_OF_BOTH	FALSE	1
ICGC_MB89	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE->ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE	FALSE	3
ICGC_MB89	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH->ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE	FALSE	1
ICGC_MB94	ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	FALSE	2
ICGC_MB94	ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH->ON_SHARED_CHROM__OUTSIDE_TAD__HIGH_OF_BOTH	FALSE	1
ICGC_MB94	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	FALSE	1

GH08J127924 - (chr8:128937031-128944862)

Promoter/Enhancer - within gene TAD

SVs

sample_ID	position_category_SV	cis_activated_gene	n
ICGC_MB106	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE<->ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE	FALSE	1
ICGC_MB106	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE<->ON_SHARED_CHROM__OUTSIDE_TAD__HIGH_OF_BOTH	FALSE	2
ICGC_MB198	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE<->ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE	TRUE	1
ICGC_MB198	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE<->ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH	TRUE	1
ICGC_MB198	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH<->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	TRUE	4
ICGC_MB198	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH<->ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE	TRUE	4
ICGC_MB205	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH<->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	FALSE	1
ICGC_MB248	ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH<->ON_SHARED_CHROM__OUTSIDE_TAD__HIGH_OF_BOTH	TRUE	1
ICGC_MB248	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE<->ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH	TRUE	1
ICGC_MB248	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH<->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	TRUE	1
ICGC_MB248	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH<->ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE	TRUE	1
ICGC_MB50	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH<->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	FALSE	4
ICGC_MB89	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE<->ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH	FALSE	1
ICGC_MB89	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH<->ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE	FALSE	2
ICGC_MB94	ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH<->ON_SHARED_CHROM__OUTSIDE_TAD__HIGH_OF_BOTH	FALSE	1
ICGC_MB94	ON_SHARED_CHROM__OUTSIDE_TAD__HIGH_OF_BOTH<->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	FALSE	1
ICGC_MB94	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH<->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	FALSE	1

CNAs

sample_ID	position_category_CNA	cis_activated_gene	n
ICGC_MB106	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE->ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE	FALSE	1
ICGC_MB106	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE->ON_SHARED_CHROM__OUTSIDE_TAD__HIGH_OF_BOTH	FALSE	1
ICGC_MB106	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH->ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE	FALSE	1
ICGC_MB198	ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	TRUE	3
ICGC_MB198	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	TRUE	1
ICGC_MB198	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE->ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE	TRUE	4
ICGC_MB198	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH->ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE	TRUE	1
ICGC_MB205	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	FALSE	1
ICGC_MB248	ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	TRUE	1
ICGC_MB248	ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH->ON_SHARED_CHROM__OUTSIDE_TAD__HIGH_OF_BOTH	TRUE	1
ICGC_MB248	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	TRUE	1
ICGC_MB248	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE->ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE	TRUE	1
ICGC_MB248	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH->ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE	TRUE	1
ICGC_MB50	ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	FALSE	3
ICGC_MB50	ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH->ON_SHARED_CHROM__OUTSIDE_TAD__HIGH_OF_BOTH	FALSE	1
ICGC_MB50	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	FALSE	1
ICGC_MB62	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE->ON_SHARED_CHROM__OUTSIDE_TAD__HIGH_OF_BOTH	FALSE	1
ICGC_MB89	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE->ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE	FALSE	3
ICGC_MB89	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH->ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE	FALSE	1
ICGC_MB94	ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	FALSE	2
ICGC_MB94	ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH->ON_SHARED_CHROM__OUTSIDE_TAD__HIGH_OF_BOTH	FALSE	1
ICGC_MB94	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	FALSE	1

GH08J127934 - (chr8:128946047-128946246)

Enhancer - within gene TAD

SVs

sample_ID	position_category_SV	cis_activated_gene	n
ICGC_MB106	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE<->ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE	FALSE	1
ICGC_MB106	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE<->ON_SHARED_CHROM__OUTSIDE_TAD__HIGH_OF_BOTH	FALSE	2
ICGC_MB198	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE<->ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE	TRUE	1
ICGC_MB198	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE<->ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH	TRUE	1
ICGC_MB198	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH<->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	TRUE	4
ICGC_MB198	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH<->ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE	TRUE	4
ICGC_MB205	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH<->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	FALSE	1
ICGC_MB248	ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH<->ON_SHARED_CHROM__OUTSIDE_TAD__HIGH_OF_BOTH	TRUE	1
ICGC_MB248	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE<->ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH	TRUE	1
ICGC_MB248	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH<->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	TRUE	1
ICGC_MB248	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH<->ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE	TRUE	1
ICGC_MB50	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH<->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	FALSE	4
ICGC_MB89	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE<->ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH	FALSE	1
ICGC_MB89	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH<->ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE	FALSE	2
ICGC_MB94	ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH<->ON_SHARED_CHROM__OUTSIDE_TAD__HIGH_OF_BOTH	FALSE	1
ICGC_MB94	ON_SHARED_CHROM__OUTSIDE_TAD__HIGH_OF_BOTH<->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	FALSE	1
ICGC_MB94	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH<->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	FALSE	1

CNAs

sample_ID	position_category_CNA	cis_activated_gene	n
ICGC_MB106	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE->ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE	FALSE	1
ICGC_MB106	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE->ON_SHARED_CHROM__OUTSIDE_TAD__HIGH_OF_BOTH	FALSE	1
ICGC_MB106	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH->ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE	FALSE	1
ICGC_MB198	ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	TRUE	3
ICGC_MB198	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	TRUE	1
ICGC_MB198	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE->ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE	TRUE	4
ICGC_MB198	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH->ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE	TRUE	1
ICGC_MB205	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	FALSE	1
ICGC_MB248	ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	TRUE	1
ICGC_MB248	ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH->ON_SHARED_CHROM__OUTSIDE_TAD__HIGH_OF_BOTH	TRUE	1
ICGC_MB248	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	TRUE	1
ICGC_MB248	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE->ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE	TRUE	1
ICGC_MB248	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH->ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE	TRUE	1
ICGC_MB50	ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	FALSE	3
ICGC_MB50	ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH->ON_SHARED_CHROM__OUTSIDE_TAD__HIGH_OF_BOTH	FALSE	1
ICGC_MB50	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	FALSE	1
ICGC_MB62	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE->ON_SHARED_CHROM__OUTSIDE_TAD__HIGH_OF_BOTH	FALSE	1
ICGC_MB89	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE->ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE	FALSE	3
ICGC_MB89	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH->ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE	FALSE	1
ICGC_MB94	ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	FALSE	2
ICGC_MB94	ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH->ON_SHARED_CHROM__OUTSIDE_TAD__HIGH_OF_BOTH	FALSE	1
ICGC_MB94	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	FALSE	1

GH08J127936 - (chr8:128946847-128952446)

Enhancer - within gene TAD

SVs

sample_ID	position_category_SV	cis_activated_gene	n
ICGC_MB106	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE<->ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE	FALSE	1
ICGC_MB106	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE<->ON_SHARED_CHROM__OUTSIDE_TAD__HIGH_OF_BOTH	FALSE	2
ICGC_MB198	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE<->ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE	TRUE	1
ICGC_MB198	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE<->ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH	TRUE	1
ICGC_MB198	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH<->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	TRUE	4
ICGC_MB198	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH<->ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE	TRUE	4
ICGC_MB205	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH<->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	FALSE	1
ICGC_MB248	ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH<->ON_SHARED_CHROM__OUTSIDE_TAD__HIGH_OF_BOTH	TRUE	1
ICGC_MB248	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE<->ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH	TRUE	1
ICGC_MB248	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH<->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	TRUE	1
ICGC_MB248	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH<->ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE	TRUE	1
ICGC_MB50	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH<->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	FALSE	4
ICGC_MB89	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE<->ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH	FALSE	1
ICGC_MB89	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH<->ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE	FALSE	2
ICGC_MB94	ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH<->ON_SHARED_CHROM__OUTSIDE_TAD__HIGH_OF_BOTH	FALSE	1
ICGC_MB94	ON_SHARED_CHROM__OUTSIDE_TAD__HIGH_OF_BOTH<->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	FALSE	1
ICGC_MB94	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH<->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	FALSE	1

CNAs

sample_ID	position_category_CNA	cis_activated_gene	n
ICGC_MB106	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE->ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE	FALSE	1
ICGC_MB106	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE->ON_SHARED_CHROM__OUTSIDE_TAD__HIGH_OF_BOTH	FALSE	1
ICGC_MB106	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH->ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE	FALSE	1
ICGC_MB198	ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	TRUE	3
ICGC_MB198	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	TRUE	1
ICGC_MB198	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE->ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE	TRUE	4
ICGC_MB198	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH->ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE	TRUE	1
ICGC_MB205	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	FALSE	1
ICGC_MB248	ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	TRUE	1
ICGC_MB248	ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH->ON_SHARED_CHROM__OUTSIDE_TAD__HIGH_OF_BOTH	TRUE	1
ICGC_MB248	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	TRUE	1
ICGC_MB248	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE->ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE	TRUE	1
ICGC_MB248	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH->ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE	TRUE	1
ICGC_MB50	ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	FALSE	3
ICGC_MB50	ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH->ON_SHARED_CHROM__OUTSIDE_TAD__HIGH_OF_BOTH	FALSE	1
ICGC_MB50	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	FALSE	1
ICGC_MB62	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE->ON_SHARED_CHROM__OUTSIDE_TAD__HIGH_OF_BOTH	FALSE	1
ICGC_MB89	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE->ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE	FALSE	3
ICGC_MB89	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH->ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE	FALSE	1
ICGC_MB94	ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	FALSE	2
ICGC_MB94	ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH->ON_SHARED_CHROM__OUTSIDE_TAD__HIGH_OF_BOTH	FALSE	1
ICGC_MB94	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	FALSE	1

somatic SNVs

sample_ID	cis_activated_gene	n_within_genehancer
ICGC_MB175	FALSE	1
ICGC_MB84	FALSE	1

GH08J127940 - (chr8:128953081-128953230)

Enhancer - within gene TAD

SVs

sample_ID	position_category_SV	cis_activated_gene	n
ICGC_MB106	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE<->ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE	FALSE	1
ICGC_MB106	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE<->ON_SHARED_CHROM__OUTSIDE_TAD__HIGH_OF_BOTH	FALSE	2
ICGC_MB198	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE<->ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE	TRUE	1
ICGC_MB198	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE<->ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH	TRUE	1
ICGC_MB198	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH<->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	TRUE	4
ICGC_MB198	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH<->ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE	TRUE	4
ICGC_MB205	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH<->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	FALSE	1
ICGC_MB248	ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH<->ON_SHARED_CHROM__OUTSIDE_TAD__HIGH_OF_BOTH	TRUE	1
ICGC_MB248	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE<->ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH	TRUE	1
ICGC_MB248	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH<->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	TRUE	1
ICGC_MB248	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH<->ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE	TRUE	1
ICGC_MB50	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH<->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	FALSE	4
ICGC_MB89	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE<->ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH	FALSE	1
ICGC_MB89	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH<->ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE	FALSE	2
ICGC_MB94	ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH<->ON_SHARED_CHROM__OUTSIDE_TAD__HIGH_OF_BOTH	FALSE	1
ICGC_MB94	ON_SHARED_CHROM__OUTSIDE_TAD__HIGH_OF_BOTH<->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	FALSE	1
ICGC_MB94	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH<->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	FALSE	1

CNAs

sample_ID	position_category_CNA	cis_activated_gene	n
ICGC_MB106	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE->ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE	FALSE	1
ICGC_MB106	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE->ON_SHARED_CHROM__OUTSIDE_TAD__HIGH_OF_BOTH	FALSE	1
ICGC_MB106	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH->ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE	FALSE	1
ICGC_MB198	ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	TRUE	3
ICGC_MB198	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	TRUE	1
ICGC_MB198	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE->ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE	TRUE	4
ICGC_MB198	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH->ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE	TRUE	1
ICGC_MB205	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	FALSE	1
ICGC_MB248	ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	TRUE	1
ICGC_MB248	ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH->ON_SHARED_CHROM__OUTSIDE_TAD__HIGH_OF_BOTH	TRUE	1
ICGC_MB248	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	TRUE	1
ICGC_MB248	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE->ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE	TRUE	1
ICGC_MB248	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH->ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE	TRUE	1
ICGC_MB50	ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	FALSE	3
ICGC_MB50	ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH->ON_SHARED_CHROM__OUTSIDE_TAD__HIGH_OF_BOTH	FALSE	1
ICGC_MB50	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	FALSE	1
ICGC_MB62	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE->ON_SHARED_CHROM__OUTSIDE_TAD__HIGH_OF_BOTH	FALSE	1
ICGC_MB89	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE->ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE	FALSE	3
ICGC_MB89	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH->ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE	FALSE	1
ICGC_MB94	ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	FALSE	2
ICGC_MB94	ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH->ON_SHARED_CHROM__OUTSIDE_TAD__HIGH_OF_BOTH	FALSE	1
ICGC_MB94	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	FALSE	1

GH08J127941 - (chr8:128954247-128954647)

Enhancer - within gene TAD

SVs

sample_ID	position_category_SV	cis_activated_gene	n
ICGC_MB106	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE<->ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE	FALSE	1
ICGC_MB106	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE<->ON_SHARED_CHROM__OUTSIDE_TAD__HIGH_OF_BOTH	FALSE	2
ICGC_MB198	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE<->ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE	TRUE	1
ICGC_MB198	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE<->ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH	TRUE	1
ICGC_MB198	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH<->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	TRUE	4
ICGC_MB198	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH<->ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE	TRUE	4
ICGC_MB205	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH<->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	FALSE	1
ICGC_MB248	ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH<->ON_SHARED_CHROM__OUTSIDE_TAD__HIGH_OF_BOTH	TRUE	1
ICGC_MB248	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE<->ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH	TRUE	1
ICGC_MB248	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH<->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	TRUE	1
ICGC_MB248	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH<->ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE	TRUE	1
ICGC_MB50	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH<->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	FALSE	4
ICGC_MB89	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE<->ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH	FALSE	1
ICGC_MB89	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH<->ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE	FALSE	2
ICGC_MB94	ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH<->ON_SHARED_CHROM__OUTSIDE_TAD__HIGH_OF_BOTH	FALSE	1
ICGC_MB94	ON_SHARED_CHROM__OUTSIDE_TAD__HIGH_OF_BOTH<->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	FALSE	1
ICGC_MB94	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH<->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	FALSE	1

CNAs

sample_ID	position_category_CNA	cis_activated_gene	n
ICGC_MB106	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE->ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE	FALSE	1
ICGC_MB106	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE->ON_SHARED_CHROM__OUTSIDE_TAD__HIGH_OF_BOTH	FALSE	1
ICGC_MB106	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH->ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE	FALSE	1
ICGC_MB198	ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	TRUE	3
ICGC_MB198	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	TRUE	1
ICGC_MB198	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE->ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE	TRUE	4
ICGC_MB198	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH->ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE	TRUE	1
ICGC_MB205	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	FALSE	1
ICGC_MB248	ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	TRUE	1
ICGC_MB248	ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH->ON_SHARED_CHROM__OUTSIDE_TAD__HIGH_OF_BOTH	TRUE	1
ICGC_MB248	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	TRUE	1
ICGC_MB248	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE->ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE	TRUE	1
ICGC_MB248	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH->ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE	TRUE	1
ICGC_MB50	ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	FALSE	3
ICGC_MB50	ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH->ON_SHARED_CHROM__OUTSIDE_TAD__HIGH_OF_BOTH	FALSE	1
ICGC_MB50	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	FALSE	1
ICGC_MB62	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE->ON_SHARED_CHROM__OUTSIDE_TAD__HIGH_OF_BOTH	FALSE	1
ICGC_MB89	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE->ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE	FALSE	3
ICGC_MB89	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH->ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE	FALSE	1
ICGC_MB94	ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	FALSE	2
ICGC_MB94	ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH->ON_SHARED_CHROM__OUTSIDE_TAD__HIGH_OF_BOTH	FALSE	1
ICGC_MB94	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	FALSE	1

GH08J127943 - (chr8:128955788-128958905)

Enhancer - within gene TAD

SVs

sample_ID	position_category_SV	cis_activated_gene	n
ICGC_MB106	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE<->ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE	FALSE	1
ICGC_MB106	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE<->ON_SHARED_CHROM__OUTSIDE_TAD__HIGH_OF_BOTH	FALSE	2
ICGC_MB198	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE<->ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE	TRUE	1
ICGC_MB198	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE<->ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH	TRUE	1
ICGC_MB198	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH<->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	TRUE	4
ICGC_MB198	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH<->ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE	TRUE	4
ICGC_MB205	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH<->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	FALSE	1
ICGC_MB248	ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH<->ON_SHARED_CHROM__OUTSIDE_TAD__HIGH_OF_BOTH	TRUE	1
ICGC_MB248	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE<->ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH	TRUE	1
ICGC_MB248	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH<->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	TRUE	1
ICGC_MB248	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH<->ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE	TRUE	1
ICGC_MB50	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH<->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	FALSE	4
ICGC_MB89	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE<->ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH	FALSE	1
ICGC_MB89	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH<->ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE	FALSE	2
ICGC_MB94	ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH<->ON_SHARED_CHROM__OUTSIDE_TAD__HIGH_OF_BOTH	FALSE	1
ICGC_MB94	ON_SHARED_CHROM__OUTSIDE_TAD__HIGH_OF_BOTH<->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	FALSE	1
ICGC_MB94	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH<->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	FALSE	1

CNAs

sample_ID	position_category_CNA	cis_activated_gene	n
ICGC_MB106	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE->ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE	FALSE	1
ICGC_MB106	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE->ON_SHARED_CHROM__OUTSIDE_TAD__HIGH_OF_BOTH	FALSE	1
ICGC_MB106	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH->ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE	FALSE	1
ICGC_MB198	ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	TRUE	3
ICGC_MB198	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	TRUE	1
ICGC_MB198	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE->ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE	TRUE	4
ICGC_MB198	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH->ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE	TRUE	1
ICGC_MB205	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	FALSE	1
ICGC_MB248	ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	TRUE	1
ICGC_MB248	ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH->ON_SHARED_CHROM__OUTSIDE_TAD__HIGH_OF_BOTH	TRUE	1
ICGC_MB248	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	TRUE	1
ICGC_MB248	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE->ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE	TRUE	1
ICGC_MB248	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH->ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE	TRUE	1
ICGC_MB50	ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	FALSE	3
ICGC_MB50	ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH->ON_SHARED_CHROM__OUTSIDE_TAD__HIGH_OF_BOTH	FALSE	1
ICGC_MB50	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	FALSE	1
ICGC_MB62	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE->ON_SHARED_CHROM__OUTSIDE_TAD__HIGH_OF_BOTH	FALSE	1
ICGC_MB89	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE->ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE	FALSE	3
ICGC_MB89	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH->ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE	FALSE	1
ICGC_MB94	ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	FALSE	2
ICGC_MB94	ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH->ON_SHARED_CHROM__OUTSIDE_TAD__HIGH_OF_BOTH	FALSE	1
ICGC_MB94	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	FALSE	1

GH08J127947 - (chr8:128960048-128965612)

Enhancer - within gene TAD

SVs

sample_ID	position_category_SV	cis_activated_gene	n
ICGC_MB106	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE<->ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE	FALSE	1
ICGC_MB106	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE<->ON_SHARED_CHROM__OUTSIDE_TAD__HIGH_OF_BOTH	FALSE	2
ICGC_MB198	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE<->ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE	TRUE	1
ICGC_MB198	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE<->ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH	TRUE	1
ICGC_MB198	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH<->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	TRUE	4
ICGC_MB198	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH<->ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE	TRUE	4
ICGC_MB205	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH<->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	FALSE	1
ICGC_MB248	ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH<->ON_SHARED_CHROM__OUTSIDE_TAD__HIGH_OF_BOTH	TRUE	1
ICGC_MB248	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE<->ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH	TRUE	1
ICGC_MB248	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH<->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	TRUE	1
ICGC_MB248	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH<->ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE	TRUE	1
ICGC_MB50	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH<->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	FALSE	4
ICGC_MB89	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE<->ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH	FALSE	1
ICGC_MB89	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH<->ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE	FALSE	2
ICGC_MB94	ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH<->ON_SHARED_CHROM__OUTSIDE_TAD__HIGH_OF_BOTH	FALSE	1
ICGC_MB94	ON_SHARED_CHROM__OUTSIDE_TAD__HIGH_OF_BOTH<->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	FALSE	1
ICGC_MB94	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH<->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	FALSE	1

CNAs

sample_ID	position_category_CNA	cis_activated_gene	n
ICGC_MB106	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE->ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE	FALSE	1
ICGC_MB106	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE->ON_SHARED_CHROM__OUTSIDE_TAD__HIGH_OF_BOTH	FALSE	1
ICGC_MB106	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH->ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE	FALSE	1
ICGC_MB198	ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	TRUE	3
ICGC_MB198	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	TRUE	1
ICGC_MB198	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE->ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE	TRUE	4
ICGC_MB198	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH->ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE	TRUE	1
ICGC_MB205	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	FALSE	1
ICGC_MB248	ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	TRUE	1
ICGC_MB248	ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH->ON_SHARED_CHROM__OUTSIDE_TAD__HIGH_OF_BOTH	TRUE	1
ICGC_MB248	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	TRUE	1
ICGC_MB248	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE->ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE	TRUE	1
ICGC_MB248	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH->ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE	TRUE	1
ICGC_MB50	ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	FALSE	3
ICGC_MB50	ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH->ON_SHARED_CHROM__OUTSIDE_TAD__HIGH_OF_BOTH	FALSE	1
ICGC_MB50	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	FALSE	1
ICGC_MB62	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE->ON_SHARED_CHROM__OUTSIDE_TAD__HIGH_OF_BOTH	FALSE	1
ICGC_MB89	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE->ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE	FALSE	3
ICGC_MB89	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH->ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE	FALSE	1
ICGC_MB94	ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	FALSE	2
ICGC_MB94	ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH->ON_SHARED_CHROM__OUTSIDE_TAD__HIGH_OF_BOTH	FALSE	1
ICGC_MB94	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	FALSE	1

GH08J127955 - (chr8:128968047-128969046)

Enhancer - within gene TAD

SVs

sample_ID	position_category_SV	cis_activated_gene	n
ICGC_MB106	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE<->ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE	FALSE	1
ICGC_MB106	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE<->ON_SHARED_CHROM__OUTSIDE_TAD__HIGH_OF_BOTH	FALSE	2
ICGC_MB198	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE<->ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE	TRUE	1
ICGC_MB198	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE<->ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH	TRUE	1
ICGC_MB198	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH<->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	TRUE	4
ICGC_MB198	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH<->ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE	TRUE	4
ICGC_MB205	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH<->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	FALSE	1
ICGC_MB248	ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH<->ON_SHARED_CHROM__OUTSIDE_TAD__HIGH_OF_BOTH	TRUE	1
ICGC_MB248	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE<->ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH	TRUE	1
ICGC_MB248	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH<->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	TRUE	1
ICGC_MB248	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH<->ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE	TRUE	1
ICGC_MB50	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH<->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	FALSE	4
ICGC_MB89	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE<->ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH	FALSE	1
ICGC_MB89	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH<->ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE	FALSE	2
ICGC_MB94	ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH<->ON_SHARED_CHROM__OUTSIDE_TAD__HIGH_OF_BOTH	FALSE	1
ICGC_MB94	ON_SHARED_CHROM__OUTSIDE_TAD__HIGH_OF_BOTH<->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	FALSE	1
ICGC_MB94	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH<->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	FALSE	1

CNAs

sample_ID	position_category_CNA	cis_activated_gene	n
ICGC_MB106	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE->ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE	FALSE	1
ICGC_MB106	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE->ON_SHARED_CHROM__OUTSIDE_TAD__HIGH_OF_BOTH	FALSE	1
ICGC_MB106	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH->ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE	FALSE	1
ICGC_MB198	ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	TRUE	3
ICGC_MB198	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	TRUE	1
ICGC_MB198	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE->ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE	TRUE	4
ICGC_MB198	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH->ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE	TRUE	1
ICGC_MB205	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	FALSE	1
ICGC_MB248	ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	TRUE	1
ICGC_MB248	ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH->ON_SHARED_CHROM__OUTSIDE_TAD__HIGH_OF_BOTH	TRUE	1
ICGC_MB248	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	TRUE	1
ICGC_MB248	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE->ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE	TRUE	1
ICGC_MB248	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH->ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE	TRUE	1
ICGC_MB50	ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	FALSE	3
ICGC_MB50	ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH->ON_SHARED_CHROM__OUTSIDE_TAD__HIGH_OF_BOTH	FALSE	1
ICGC_MB50	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	FALSE	1
ICGC_MB62	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE->ON_SHARED_CHROM__OUTSIDE_TAD__HIGH_OF_BOTH	FALSE	1
ICGC_MB89	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE->ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE	FALSE	3
ICGC_MB89	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH->ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE	FALSE	1
ICGC_MB94	ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	FALSE	2
ICGC_MB94	ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH->ON_SHARED_CHROM__OUTSIDE_TAD__HIGH_OF_BOTH	FALSE	1
ICGC_MB94	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	FALSE	1

GH08J127966 - (chr8:128978473-128985063)

Enhancer - within gene TAD

SVs

sample_ID	position_category_SV	cis_activated_gene	n
ICGC_MB106	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE<->ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE	FALSE	1
ICGC_MB106	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE<->ON_SHARED_CHROM__OUTSIDE_TAD__HIGH_OF_BOTH	FALSE	2
ICGC_MB198	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE<->ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE	TRUE	1
ICGC_MB198	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE<->ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH	TRUE	1
ICGC_MB198	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH<->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	TRUE	4
ICGC_MB198	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH<->ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE	TRUE	4
ICGC_MB205	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH<->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	FALSE	1
ICGC_MB248	ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH<->ON_SHARED_CHROM__OUTSIDE_TAD__HIGH_OF_BOTH	TRUE	1
ICGC_MB248	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE<->ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH	TRUE	1
ICGC_MB248	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH<->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	TRUE	1
ICGC_MB248	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH<->ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE	TRUE	1
ICGC_MB50	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH<->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	FALSE	4
ICGC_MB89	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE<->ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH	FALSE	1
ICGC_MB89	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH<->ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE	FALSE	2
ICGC_MB94	ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH<->ON_SHARED_CHROM__OUTSIDE_TAD__HIGH_OF_BOTH	FALSE	1
ICGC_MB94	ON_SHARED_CHROM__OUTSIDE_TAD__HIGH_OF_BOTH<->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	FALSE	1
ICGC_MB94	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH<->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	FALSE	1

CNAs

sample_ID	position_category_CNA	cis_activated_gene	n
ICGC_MB106	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE->ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE	FALSE	1
ICGC_MB106	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE->ON_SHARED_CHROM__OUTSIDE_TAD__HIGH_OF_BOTH	FALSE	1
ICGC_MB106	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH->ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE	FALSE	1
ICGC_MB198	ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	TRUE	3
ICGC_MB198	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	TRUE	1
ICGC_MB198	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE->ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE	TRUE	4
ICGC_MB198	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH->ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE	TRUE	1
ICGC_MB205	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	FALSE	1
ICGC_MB248	ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	TRUE	1
ICGC_MB248	ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH->ON_SHARED_CHROM__OUTSIDE_TAD__HIGH_OF_BOTH	TRUE	1
ICGC_MB248	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	TRUE	1
ICGC_MB248	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE->ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE	TRUE	1
ICGC_MB248	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH->ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE	TRUE	1
ICGC_MB50	ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	FALSE	3
ICGC_MB50	ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH->ON_SHARED_CHROM__OUTSIDE_TAD__HIGH_OF_BOTH	FALSE	1
ICGC_MB50	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	FALSE	1
ICGC_MB62	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE->ON_SHARED_CHROM__OUTSIDE_TAD__HIGH_OF_BOTH	FALSE	1
ICGC_MB89	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE->ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE	FALSE	3
ICGC_MB89	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH->ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE	FALSE	1
ICGC_MB94	ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	FALSE	2
ICGC_MB94	ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH->ON_SHARED_CHROM__OUTSIDE_TAD__HIGH_OF_BOTH	FALSE	1
ICGC_MB94	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	FALSE	1

GH08J127972 - (chr8:128985243-128994772)

Promoter/Enhancer - within gene TAD

SVs

sample_ID	position_category_SV	cis_activated_gene	n
ICGC_MB106	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE<->ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE	FALSE	1
ICGC_MB106	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE<->ON_SHARED_CHROM__OUTSIDE_TAD__HIGH_OF_BOTH	FALSE	2
ICGC_MB198	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE<->ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE	TRUE	1
ICGC_MB198	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE<->ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH	TRUE	1
ICGC_MB198	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH<->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	TRUE	4
ICGC_MB198	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH<->ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE	TRUE	4
ICGC_MB205	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH<->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	FALSE	1
ICGC_MB248	ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH<->ON_SHARED_CHROM__OUTSIDE_TAD__HIGH_OF_BOTH	TRUE	1
ICGC_MB248	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE<->ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH	TRUE	1
ICGC_MB248	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH<->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	TRUE	1
ICGC_MB248	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH<->ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE	TRUE	1
ICGC_MB50	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH<->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	FALSE	4
ICGC_MB89	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE<->ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH	FALSE	1
ICGC_MB89	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH<->ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE	FALSE	2
ICGC_MB94	ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH<->ON_SHARED_CHROM__OUTSIDE_TAD__HIGH_OF_BOTH	FALSE	1
ICGC_MB94	ON_SHARED_CHROM__OUTSIDE_TAD__HIGH_OF_BOTH<->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	FALSE	1
ICGC_MB94	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH<->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	FALSE	1

CNAs

sample_ID	position_category_CNA	cis_activated_gene	n
ICGC_MB106	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE->ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE	FALSE	1
ICGC_MB106	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE->ON_SHARED_CHROM__OUTSIDE_TAD__HIGH_OF_BOTH	FALSE	1
ICGC_MB106	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH->ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE	FALSE	1
ICGC_MB198	ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	TRUE	3
ICGC_MB198	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	TRUE	1
ICGC_MB198	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE->ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE	TRUE	4
ICGC_MB198	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH->ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE	TRUE	1
ICGC_MB205	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	FALSE	1
ICGC_MB248	ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	TRUE	1
ICGC_MB248	ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH->ON_SHARED_CHROM__OUTSIDE_TAD__HIGH_OF_BOTH	TRUE	1
ICGC_MB248	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	TRUE	1
ICGC_MB248	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE->ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE	TRUE	1
ICGC_MB248	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH->ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE	TRUE	1
ICGC_MB50	ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	FALSE	3
ICGC_MB50	ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH->ON_SHARED_CHROM__OUTSIDE_TAD__HIGH_OF_BOTH	FALSE	1
ICGC_MB50	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	FALSE	1
ICGC_MB62	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE->ON_SHARED_CHROM__OUTSIDE_TAD__HIGH_OF_BOTH	FALSE	1
ICGC_MB89	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE->ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE	FALSE	3
ICGC_MB89	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH->ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE	FALSE	1
ICGC_MB94	ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	FALSE	2
ICGC_MB94	ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH->ON_SHARED_CHROM__OUTSIDE_TAD__HIGH_OF_BOTH	FALSE	1
ICGC_MB94	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	FALSE	1

GH08J127986 - (chr8:128999068-129001154)

Enhancer - within gene TAD

SVs

sample_ID	position_category_SV	cis_activated_gene	n
ICGC_MB106	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE<->ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE	FALSE	1
ICGC_MB106	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE<->ON_SHARED_CHROM__OUTSIDE_TAD__HIGH_OF_BOTH	FALSE	2
ICGC_MB198	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE<->ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE	TRUE	1
ICGC_MB198	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE<->ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH	TRUE	1
ICGC_MB198	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH<->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	TRUE	4
ICGC_MB198	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH<->ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE	TRUE	4
ICGC_MB205	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH<->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	FALSE	1
ICGC_MB248	ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH<->ON_SHARED_CHROM__OUTSIDE_TAD__HIGH_OF_BOTH	TRUE	1
ICGC_MB248	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE<->ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH	TRUE	1
ICGC_MB248	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH<->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	TRUE	1
ICGC_MB248	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH<->ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE	TRUE	1
ICGC_MB50	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH<->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	FALSE	4
ICGC_MB89	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE<->ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH	FALSE	1
ICGC_MB89	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH<->ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE	FALSE	2
ICGC_MB94	ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH<->ON_SHARED_CHROM__OUTSIDE_TAD__HIGH_OF_BOTH	FALSE	1
ICGC_MB94	ON_SHARED_CHROM__OUTSIDE_TAD__HIGH_OF_BOTH<->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	FALSE	1
ICGC_MB94	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH<->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	FALSE	1

CNAs

sample_ID	position_category_CNA	cis_activated_gene	n
ICGC_MB106	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE->ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE	FALSE	1
ICGC_MB106	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE->ON_SHARED_CHROM__OUTSIDE_TAD__HIGH_OF_BOTH	FALSE	1
ICGC_MB106	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH->ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE	FALSE	1
ICGC_MB198	ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	TRUE	3
ICGC_MB198	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	TRUE	1
ICGC_MB198	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE->ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE	TRUE	4
ICGC_MB198	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH->ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE	TRUE	1
ICGC_MB205	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	FALSE	1
ICGC_MB248	ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	TRUE	1
ICGC_MB248	ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH->ON_SHARED_CHROM__OUTSIDE_TAD__HIGH_OF_BOTH	TRUE	1
ICGC_MB248	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	TRUE	1
ICGC_MB248	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE->ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE	TRUE	1
ICGC_MB248	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH->ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE	TRUE	1
ICGC_MB50	ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	FALSE	3
ICGC_MB50	ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH->ON_SHARED_CHROM__OUTSIDE_TAD__HIGH_OF_BOTH	FALSE	1
ICGC_MB50	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	FALSE	1
ICGC_MB62	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE->ON_SHARED_CHROM__OUTSIDE_TAD__HIGH_OF_BOTH	FALSE	1
ICGC_MB89	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE->ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE	FALSE	3
ICGC_MB89	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH->ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE	FALSE	1
ICGC_MB94	ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	FALSE	2
ICGC_MB94	ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH->ON_SHARED_CHROM__OUTSIDE_TAD__HIGH_OF_BOTH	FALSE	1
ICGC_MB94	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	FALSE	1

GH08J127990 - (chr8:129002909-129003328)

Enhancer - within gene TAD

SVs

sample_ID	position_category_SV	cis_activated_gene	n
ICGC_MB106	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE<->ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE	FALSE	1
ICGC_MB106	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE<->ON_SHARED_CHROM__OUTSIDE_TAD__HIGH_OF_BOTH	FALSE	2
ICGC_MB198	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE<->ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE	TRUE	1
ICGC_MB198	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE<->ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH	TRUE	1
ICGC_MB198	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH<->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	TRUE	4
ICGC_MB198	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH<->ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE	TRUE	4
ICGC_MB205	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH<->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	FALSE	1
ICGC_MB248	ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH<->ON_SHARED_CHROM__OUTSIDE_TAD__HIGH_OF_BOTH	TRUE	1
ICGC_MB248	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE<->ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH	TRUE	1
ICGC_MB248	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH<->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	TRUE	1
ICGC_MB248	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH<->ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE	TRUE	1
ICGC_MB50	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH<->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	FALSE	4
ICGC_MB89	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE<->ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH	FALSE	1
ICGC_MB89	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH<->ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE	FALSE	2
ICGC_MB94	ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH<->ON_SHARED_CHROM__OUTSIDE_TAD__HIGH_OF_BOTH	FALSE	1
ICGC_MB94	ON_SHARED_CHROM__OUTSIDE_TAD__HIGH_OF_BOTH<->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	FALSE	1
ICGC_MB94	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH<->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	FALSE	1

CNAs

sample_ID	position_category_CNA	cis_activated_gene	n
ICGC_MB106	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE->ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE	FALSE	1
ICGC_MB106	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE->ON_SHARED_CHROM__OUTSIDE_TAD__HIGH_OF_BOTH	FALSE	1
ICGC_MB106	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH->ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE	FALSE	1
ICGC_MB198	ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	TRUE	3
ICGC_MB198	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	TRUE	1
ICGC_MB198	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE->ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE	TRUE	4
ICGC_MB198	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH->ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE	TRUE	1
ICGC_MB205	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	FALSE	1
ICGC_MB248	ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	TRUE	1
ICGC_MB248	ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH->ON_SHARED_CHROM__OUTSIDE_TAD__HIGH_OF_BOTH	TRUE	1
ICGC_MB248	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	TRUE	1
ICGC_MB248	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE->ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE	TRUE	1
ICGC_MB248	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH->ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE	TRUE	1
ICGC_MB50	ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	FALSE	3
ICGC_MB50	ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH->ON_SHARED_CHROM__OUTSIDE_TAD__HIGH_OF_BOTH	FALSE	1
ICGC_MB50	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	FALSE	1
ICGC_MB62	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE->ON_SHARED_CHROM__OUTSIDE_TAD__HIGH_OF_BOTH	FALSE	1
ICGC_MB89	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE->ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE	FALSE	3
ICGC_MB89	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH->ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE	FALSE	1
ICGC_MB94	ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	FALSE	2
ICGC_MB94	ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH->ON_SHARED_CHROM__OUTSIDE_TAD__HIGH_OF_BOTH	FALSE	1
ICGC_MB94	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	FALSE	1

GH08J127992 - (chr8:129004520-129009890)

Promoter/Enhancer - within gene TAD

SVs

sample_ID	position_category_SV	cis_activated_gene	n
ICGC_MB106	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE<->ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE	FALSE	1
ICGC_MB106	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE<->ON_SHARED_CHROM__OUTSIDE_TAD__HIGH_OF_BOTH	FALSE	2
ICGC_MB198	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE<->ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE	TRUE	1
ICGC_MB198	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE<->ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH	TRUE	1
ICGC_MB198	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH<->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	TRUE	4
ICGC_MB198	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH<->ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE	TRUE	4
ICGC_MB205	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH<->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	FALSE	1
ICGC_MB248	ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH<->ON_SHARED_CHROM__OUTSIDE_TAD__HIGH_OF_BOTH	TRUE	1
ICGC_MB248	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE<->ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH	TRUE	1
ICGC_MB248	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH<->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	TRUE	1
ICGC_MB248	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH<->ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE	TRUE	1
ICGC_MB50	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH<->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	FALSE	4
ICGC_MB89	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE<->ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH	FALSE	1
ICGC_MB89	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH<->ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE	FALSE	2
ICGC_MB94	ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH<->ON_SHARED_CHROM__OUTSIDE_TAD__HIGH_OF_BOTH	FALSE	1
ICGC_MB94	ON_SHARED_CHROM__OUTSIDE_TAD__HIGH_OF_BOTH<->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	FALSE	1
ICGC_MB94	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH<->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	FALSE	1

CNAs

sample_ID	position_category_CNA	cis_activated_gene	n
ICGC_MB106	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE->ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE	FALSE	1
ICGC_MB106	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE->ON_SHARED_CHROM__OUTSIDE_TAD__HIGH_OF_BOTH	FALSE	1
ICGC_MB106	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH->ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE	FALSE	1
ICGC_MB198	ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	TRUE	3
ICGC_MB198	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	TRUE	1
ICGC_MB198	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE->ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE	TRUE	4
ICGC_MB198	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH->ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE	TRUE	1
ICGC_MB205	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	FALSE	1
ICGC_MB248	ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	TRUE	1
ICGC_MB248	ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH->ON_SHARED_CHROM__OUTSIDE_TAD__HIGH_OF_BOTH	TRUE	1
ICGC_MB248	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	TRUE	1
ICGC_MB248	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE->ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE	TRUE	1
ICGC_MB248	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH->ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE	TRUE	1
ICGC_MB50	ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	FALSE	3
ICGC_MB50	ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH->ON_SHARED_CHROM__OUTSIDE_TAD__HIGH_OF_BOTH	FALSE	1
ICGC_MB50	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	FALSE	1
ICGC_MB62	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE->ON_SHARED_CHROM__OUTSIDE_TAD__HIGH_OF_BOTH	FALSE	1
ICGC_MB89	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE->ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE	FALSE	3
ICGC_MB89	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH->ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE	FALSE	1
ICGC_MB94	ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	FALSE	2
ICGC_MB94	ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH->ON_SHARED_CHROM__OUTSIDE_TAD__HIGH_OF_BOTH	FALSE	1
ICGC_MB94	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	FALSE	1

somatic SNVs

sample_ID	cis_activated_gene	n_within_genehancer
ICGC_MB134	FALSE	1

GH08J128002 - (chr8:129011848-129016046)

Enhancer - within gene TAD

SVs

sample_ID	position_category_SV	cis_activated_gene	n
ICGC_MB106	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE<->ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE	FALSE	1
ICGC_MB106	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE<->ON_SHARED_CHROM__OUTSIDE_TAD__HIGH_OF_BOTH	FALSE	2
ICGC_MB198	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE<->ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE	TRUE	1
ICGC_MB198	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE<->ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH	TRUE	1
ICGC_MB198	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH<->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	TRUE	4
ICGC_MB198	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH<->ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE	TRUE	4
ICGC_MB205	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH<->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	FALSE	1
ICGC_MB248	ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH<->ON_SHARED_CHROM__OUTSIDE_TAD__HIGH_OF_BOTH	TRUE	1
ICGC_MB248	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE<->ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH	TRUE	1
ICGC_MB248	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH<->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	TRUE	1
ICGC_MB248	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH<->ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE	TRUE	1
ICGC_MB50	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH<->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	FALSE	4
ICGC_MB89	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE<->ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH	FALSE	1
ICGC_MB89	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH<->ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE	FALSE	2
ICGC_MB94	ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH<->ON_SHARED_CHROM__OUTSIDE_TAD__HIGH_OF_BOTH	FALSE	1
ICGC_MB94	ON_SHARED_CHROM__OUTSIDE_TAD__HIGH_OF_BOTH<->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	FALSE	1
ICGC_MB94	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH<->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	FALSE	1

CNAs

sample_ID	position_category_CNA	cis_activated_gene	n
ICGC_MB106	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE->ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE	FALSE	1
ICGC_MB106	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE->ON_SHARED_CHROM__OUTSIDE_TAD__HIGH_OF_BOTH	FALSE	1
ICGC_MB106	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH->ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE	FALSE	1
ICGC_MB198	ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	TRUE	3
ICGC_MB198	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	TRUE	1
ICGC_MB198	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE->ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE	TRUE	4
ICGC_MB198	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH->ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE	TRUE	1
ICGC_MB205	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	FALSE	1
ICGC_MB248	ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	TRUE	1
ICGC_MB248	ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH->ON_SHARED_CHROM__OUTSIDE_TAD__HIGH_OF_BOTH	TRUE	1
ICGC_MB248	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	TRUE	1
ICGC_MB248	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE->ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE	TRUE	1
ICGC_MB248	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH->ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE	TRUE	1
ICGC_MB50	ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	FALSE	3
ICGC_MB50	ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH->ON_SHARED_CHROM__OUTSIDE_TAD__HIGH_OF_BOTH	FALSE	1
ICGC_MB50	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	FALSE	1
ICGC_MB62	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE->ON_SHARED_CHROM__OUTSIDE_TAD__HIGH_OF_BOTH	FALSE	1
ICGC_MB89	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE->ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE	FALSE	3
ICGC_MB89	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH->ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE	FALSE	1
ICGC_MB94	ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	FALSE	2
ICGC_MB94	ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH->ON_SHARED_CHROM__OUTSIDE_TAD__HIGH_OF_BOTH	FALSE	1
ICGC_MB94	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	FALSE	1

GH08J128013 - (chr8:129025900-129029450)

Enhancer - within gene TAD

SVs

sample_ID	position_category_SV	cis_activated_gene	n
ICGC_MB106	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE<->ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE	FALSE	1
ICGC_MB106	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE<->ON_SHARED_CHROM__OUTSIDE_TAD__HIGH_OF_BOTH	FALSE	2
ICGC_MB198	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE<->ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE	TRUE	1
ICGC_MB198	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE<->ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH	TRUE	1
ICGC_MB198	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH<->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	TRUE	4
ICGC_MB198	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH<->ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE	TRUE	4
ICGC_MB205	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH<->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	FALSE	1
ICGC_MB248	ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH<->ON_SHARED_CHROM__OUTSIDE_TAD__HIGH_OF_BOTH	TRUE	1
ICGC_MB248	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE<->ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH	TRUE	1
ICGC_MB248	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH<->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	TRUE	1
ICGC_MB248	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH<->ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE	TRUE	1
ICGC_MB50	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH<->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	FALSE	4
ICGC_MB89	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE<->ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH	FALSE	1
ICGC_MB89	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH<->ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE	FALSE	2
ICGC_MB94	ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH<->ON_SHARED_CHROM__OUTSIDE_TAD__HIGH_OF_BOTH	FALSE	1
ICGC_MB94	ON_SHARED_CHROM__OUTSIDE_TAD__HIGH_OF_BOTH<->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	FALSE	1
ICGC_MB94	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH<->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	FALSE	1

CNAs

sample_ID	position_category_CNA	cis_activated_gene	n
ICGC_MB106	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE->ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE	FALSE	1
ICGC_MB106	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE->ON_SHARED_CHROM__OUTSIDE_TAD__HIGH_OF_BOTH	FALSE	1
ICGC_MB106	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH->ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE	FALSE	1
ICGC_MB198	ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	TRUE	3
ICGC_MB198	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	TRUE	1
ICGC_MB198	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE->ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE	TRUE	4
ICGC_MB198	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH->ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE	TRUE	1
ICGC_MB205	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	FALSE	1
ICGC_MB248	ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	TRUE	1
ICGC_MB248	ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH->ON_SHARED_CHROM__OUTSIDE_TAD__HIGH_OF_BOTH	TRUE	1
ICGC_MB248	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	TRUE	1
ICGC_MB248	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE->ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE	TRUE	1
ICGC_MB248	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH->ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE	TRUE	1
ICGC_MB50	ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	FALSE	3
ICGC_MB50	ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH->ON_SHARED_CHROM__OUTSIDE_TAD__HIGH_OF_BOTH	FALSE	1
ICGC_MB50	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	FALSE	1
ICGC_MB62	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE->ON_SHARED_CHROM__OUTSIDE_TAD__HIGH_OF_BOTH	FALSE	1
ICGC_MB89	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE->ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE	FALSE	3
ICGC_MB89	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH->ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE	FALSE	1
ICGC_MB94	ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	FALSE	2
ICGC_MB94	ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH->ON_SHARED_CHROM__OUTSIDE_TAD__HIGH_OF_BOTH	FALSE	1
ICGC_MB94	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	FALSE	1

GH08J128017 - (chr8:129029971-129032246)

Enhancer - within gene TAD

SVs

sample_ID	position_category_SV	cis_activated_gene	n
ICGC_MB106	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE<->ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE	FALSE	1
ICGC_MB106	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE<->ON_SHARED_CHROM__OUTSIDE_TAD__HIGH_OF_BOTH	FALSE	2
ICGC_MB198	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE<->ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE	TRUE	1
ICGC_MB198	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE<->ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH	TRUE	1
ICGC_MB198	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH<->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	TRUE	4
ICGC_MB198	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH<->ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE	TRUE	4
ICGC_MB205	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH<->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	FALSE	1
ICGC_MB248	ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH<->ON_SHARED_CHROM__OUTSIDE_TAD__HIGH_OF_BOTH	TRUE	1
ICGC_MB248	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE<->ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH	TRUE	1
ICGC_MB248	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH<->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	TRUE	1
ICGC_MB248	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH<->ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE	TRUE	1
ICGC_MB50	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH<->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	FALSE	4
ICGC_MB89	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE<->ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH	FALSE	1
ICGC_MB89	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH<->ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE	FALSE	2
ICGC_MB94	ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH<->ON_SHARED_CHROM__OUTSIDE_TAD__HIGH_OF_BOTH	FALSE	1
ICGC_MB94	ON_SHARED_CHROM__OUTSIDE_TAD__HIGH_OF_BOTH<->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	FALSE	1
ICGC_MB94	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH<->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	FALSE	1

CNAs

sample_ID	position_category_CNA	cis_activated_gene	n
ICGC_MB106	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE->ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE	FALSE	1
ICGC_MB106	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE->ON_SHARED_CHROM__OUTSIDE_TAD__HIGH_OF_BOTH	FALSE	1
ICGC_MB106	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH->ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE	FALSE	1
ICGC_MB198	ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	TRUE	3
ICGC_MB198	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	TRUE	1
ICGC_MB198	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE->ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE	TRUE	4
ICGC_MB198	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH->ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE	TRUE	1
ICGC_MB205	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	FALSE	1
ICGC_MB248	ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	TRUE	1
ICGC_MB248	ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH->ON_SHARED_CHROM__OUTSIDE_TAD__HIGH_OF_BOTH	TRUE	1
ICGC_MB248	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	TRUE	1
ICGC_MB248	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE->ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE	TRUE	1
ICGC_MB248	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH->ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE	TRUE	1
ICGC_MB50	ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	FALSE	3
ICGC_MB50	ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH->ON_SHARED_CHROM__OUTSIDE_TAD__HIGH_OF_BOTH	FALSE	1
ICGC_MB50	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	FALSE	1
ICGC_MB62	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE->ON_SHARED_CHROM__OUTSIDE_TAD__HIGH_OF_BOTH	FALSE	1
ICGC_MB89	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE->ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE	FALSE	3
ICGC_MB89	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH->ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE	FALSE	1
ICGC_MB94	ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	FALSE	2
ICGC_MB94	ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH->ON_SHARED_CHROM__OUTSIDE_TAD__HIGH_OF_BOTH	FALSE	1
ICGC_MB94	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	FALSE	1

somatic SNVs

sample_ID	cis_activated_gene	n_within_genehancer
ICGC_MB38	FALSE	1

GH08J128090 - (chr8:129102273-129105046)

Enhancer - within gene TAD

SVs

sample_ID	position_category_SV	cis_activated_gene	n
ICGC_MB106	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE<->ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE	FALSE	1
ICGC_MB106	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE<->ON_SHARED_CHROM__OUTSIDE_TAD__HIGH_OF_BOTH	FALSE	2
ICGC_MB198	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE<->ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE	TRUE	1
ICGC_MB198	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE<->ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH	TRUE	1
ICGC_MB198	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH<->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	TRUE	4
ICGC_MB198	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH<->ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE	TRUE	4
ICGC_MB205	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH<->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	FALSE	1
ICGC_MB248	ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH<->ON_SHARED_CHROM__OUTSIDE_TAD__HIGH_OF_BOTH	TRUE	1
ICGC_MB248	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE<->ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH	TRUE	1
ICGC_MB248	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH<->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	TRUE	1
ICGC_MB248	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH<->ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE	TRUE	1
ICGC_MB50	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH<->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	FALSE	4
ICGC_MB89	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE<->ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH	FALSE	1
ICGC_MB89	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH<->ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE	FALSE	2
ICGC_MB94	ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH<->ON_SHARED_CHROM__OUTSIDE_TAD__HIGH_OF_BOTH	FALSE	1
ICGC_MB94	ON_SHARED_CHROM__OUTSIDE_TAD__HIGH_OF_BOTH<->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	FALSE	1
ICGC_MB94	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH<->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	FALSE	1

CNAs

sample_ID	position_category_CNA	cis_activated_gene	n
ICGC_MB106	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE->ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE	FALSE	1
ICGC_MB106	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE->ON_SHARED_CHROM__OUTSIDE_TAD__HIGH_OF_BOTH	FALSE	1
ICGC_MB106	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH->ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE	FALSE	1
ICGC_MB198	ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	TRUE	3
ICGC_MB198	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	TRUE	1
ICGC_MB198	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE->ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE	TRUE	4
ICGC_MB198	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH->ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE	TRUE	1
ICGC_MB205	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	FALSE	1
ICGC_MB248	ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	TRUE	1
ICGC_MB248	ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH->ON_SHARED_CHROM__OUTSIDE_TAD__HIGH_OF_BOTH	TRUE	1
ICGC_MB248	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	TRUE	1
ICGC_MB248	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE->ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE	TRUE	1
ICGC_MB248	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH->ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE	TRUE	1
ICGC_MB50	ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	FALSE	3
ICGC_MB50	ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH->ON_SHARED_CHROM__OUTSIDE_TAD__HIGH_OF_BOTH	FALSE	1
ICGC_MB50	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	FALSE	1
ICGC_MB62	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE->ON_SHARED_CHROM__OUTSIDE_TAD__HIGH_OF_BOTH	FALSE	1
ICGC_MB89	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE->ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE	FALSE	3
ICGC_MB89	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH->ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE	FALSE	1
ICGC_MB94	ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	FALSE	2
ICGC_MB94	ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH->ON_SHARED_CHROM__OUTSIDE_TAD__HIGH_OF_BOTH	FALSE	1
ICGC_MB94	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	FALSE	1

GH08J128107 - (chr8:129119991-129122649)

Enhancer - within gene TAD

SVs

sample_ID	position_category_SV	cis_activated_gene	n
ICGC_MB106	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE<->ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE	FALSE	1
ICGC_MB106	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE<->ON_SHARED_CHROM__OUTSIDE_TAD__HIGH_OF_BOTH	FALSE	2
ICGC_MB198	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE<->ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE	TRUE	1
ICGC_MB198	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE<->ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH	TRUE	1
ICGC_MB198	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH<->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	TRUE	4
ICGC_MB198	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH<->ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE	TRUE	4
ICGC_MB205	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH<->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	FALSE	1
ICGC_MB248	ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH<->ON_SHARED_CHROM__OUTSIDE_TAD__HIGH_OF_BOTH	TRUE	1
ICGC_MB248	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE<->ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH	TRUE	1
ICGC_MB248	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH<->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	TRUE	1
ICGC_MB248	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH<->ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE	TRUE	1
ICGC_MB50	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH<->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	FALSE	4
ICGC_MB89	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE<->ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH	FALSE	1
ICGC_MB89	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH<->ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE	FALSE	2
ICGC_MB94	ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH<->ON_SHARED_CHROM__OUTSIDE_TAD__HIGH_OF_BOTH	FALSE	1
ICGC_MB94	ON_SHARED_CHROM__OUTSIDE_TAD__HIGH_OF_BOTH<->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	FALSE	1
ICGC_MB94	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH<->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	FALSE	1

CNAs

sample_ID	position_category_CNA	cis_activated_gene	n
ICGC_MB106	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE->ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE	FALSE	1
ICGC_MB106	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE->ON_SHARED_CHROM__OUTSIDE_TAD__HIGH_OF_BOTH	FALSE	1
ICGC_MB106	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH->ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE	FALSE	1
ICGC_MB198	ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	TRUE	3
ICGC_MB198	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	TRUE	1
ICGC_MB198	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE->ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE	TRUE	4
ICGC_MB198	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH->ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE	TRUE	1
ICGC_MB205	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	FALSE	1
ICGC_MB248	ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	TRUE	1
ICGC_MB248	ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH->ON_SHARED_CHROM__OUTSIDE_TAD__HIGH_OF_BOTH	TRUE	1
ICGC_MB248	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	TRUE	1
ICGC_MB248	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE->ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE	TRUE	1
ICGC_MB248	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH->ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE	TRUE	1
ICGC_MB50	ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	FALSE	3
ICGC_MB50	ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH->ON_SHARED_CHROM__OUTSIDE_TAD__HIGH_OF_BOTH	FALSE	1
ICGC_MB50	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	FALSE	1
ICGC_MB62	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE->ON_SHARED_CHROM__OUTSIDE_TAD__HIGH_OF_BOTH	FALSE	1
ICGC_MB89	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE->ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE	FALSE	3
ICGC_MB89	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH->ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE	FALSE	1
ICGC_MB94	ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	FALSE	2
ICGC_MB94	ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH->ON_SHARED_CHROM__OUTSIDE_TAD__HIGH_OF_BOTH	FALSE	1
ICGC_MB94	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	FALSE	1

GH08J128162 - (chr8:129176048-129177446)

Enhancer - within gene TAD

SVs

sample_ID	position_category_SV	cis_activated_gene	n
ICGC_MB106	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE<->ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE	FALSE	1
ICGC_MB106	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE<->ON_SHARED_CHROM__OUTSIDE_TAD__HIGH_OF_BOTH	FALSE	2
ICGC_MB198	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE<->ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE	TRUE	1
ICGC_MB198	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE<->ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH	TRUE	1
ICGC_MB198	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH<->ON_SHARED_CHROM__IN_SHARED_TAD__BETWEEN	TRUE	1
ICGC_MB198	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH<->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	TRUE	3
ICGC_MB198	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH<->ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE	TRUE	4
ICGC_MB205	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH<->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	FALSE	1
ICGC_MB248	ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH<->ON_SHARED_CHROM__OUTSIDE_TAD__HIGH_OF_BOTH	TRUE	1
ICGC_MB248	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE<->ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH	TRUE	1
ICGC_MB248	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH<->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	TRUE	1
ICGC_MB248	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH<->ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE	TRUE	1
ICGC_MB50	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH<->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	FALSE	4
ICGC_MB89	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE<->ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH	FALSE	1
ICGC_MB89	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH<->ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE	FALSE	2
ICGC_MB94	ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH<->ON_SHARED_CHROM__OUTSIDE_TAD__HIGH_OF_BOTH	FALSE	1
ICGC_MB94	ON_SHARED_CHROM__OUTSIDE_TAD__HIGH_OF_BOTH<->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	FALSE	1
ICGC_MB94	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH<->ON_SHARED_CHROM__IN_SHARED_TAD__BETWEEN	FALSE	1

CNAs

sample_ID	position_category_CNA	cis_activated_gene	n
ICGC_MB106	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE->ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE	FALSE	1
ICGC_MB106	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE->ON_SHARED_CHROM__OUTSIDE_TAD__HIGH_OF_BOTH	FALSE	1
ICGC_MB106	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH->ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE	FALSE	1
ICGC_MB198	ON_SHARED_CHROM__IN_SHARED_TAD__BETWEEN->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	TRUE	1
ICGC_MB198	ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	TRUE	2
ICGC_MB198	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE->ON_SHARED_CHROM__IN_SHARED_TAD__BETWEEN	TRUE	1
ICGC_MB198	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE->ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE	TRUE	4
ICGC_MB198	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH->ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE	TRUE	1
ICGC_MB205	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	FALSE	1
ICGC_MB248	ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	TRUE	1
ICGC_MB248	ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH->ON_SHARED_CHROM__OUTSIDE_TAD__HIGH_OF_BOTH	TRUE	1
ICGC_MB248	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	TRUE	1
ICGC_MB248	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE->ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE	TRUE	1
ICGC_MB248	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH->ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE	TRUE	1
ICGC_MB50	ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	FALSE	3
ICGC_MB50	ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH->ON_SHARED_CHROM__OUTSIDE_TAD__HIGH_OF_BOTH	FALSE	1
ICGC_MB50	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	FALSE	1
ICGC_MB62	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE->ON_SHARED_CHROM__OUTSIDE_TAD__HIGH_OF_BOTH	FALSE	1
ICGC_MB89	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE->ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE	FALSE	3
ICGC_MB89	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH->ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE	FALSE	1
ICGC_MB94	ON_SHARED_CHROM__IN_SHARED_TAD__BETWEEN->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	FALSE	1
ICGC_MB94	ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	FALSE	1
ICGC_MB94	ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH->ON_SHARED_CHROM__OUTSIDE_TAD__HIGH_OF_BOTH	FALSE	1
ICGC_MB94	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH->ON_SHARED_CHROM__IN_SHARED_TAD__BETWEEN	FALSE	1

ChIP-Seq

chr8:129085719-129088204

within gene TAD

SVs

sample_ID	position_category_SV	cis_activated_gene	n
ICGC_MB106	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE<->ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE	FALSE	1
ICGC_MB106	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE<->ON_SHARED_CHROM__OUTSIDE_TAD__HIGH_OF_BOTH	FALSE	2
ICGC_MB198	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE<->ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE	TRUE	1
ICGC_MB198	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE<->ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH	TRUE	1
ICGC_MB198	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH<->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	TRUE	4
ICGC_MB198	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH<->ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE	TRUE	4
ICGC_MB205	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH<->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	FALSE	1
ICGC_MB248	ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH<->ON_SHARED_CHROM__OUTSIDE_TAD__HIGH_OF_BOTH	TRUE	1
ICGC_MB248	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE<->ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH	TRUE	1
ICGC_MB248	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH<->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	TRUE	1
ICGC_MB248	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH<->ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE	TRUE	1
ICGC_MB50	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH<->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	FALSE	4
ICGC_MB89	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE<->ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH	FALSE	1
ICGC_MB89	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH<->ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE	FALSE	2

CNAs

sample_ID	position_category_CNA	cis_activated_gene	n
ICGC_MB106	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE->ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE	FALSE	1
ICGC_MB106	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE->ON_SHARED_CHROM__OUTSIDE_TAD__HIGH_OF_BOTH	FALSE	1
ICGC_MB106	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH->ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE	FALSE	1
ICGC_MB198	ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	TRUE	3
ICGC_MB198	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	TRUE	1
ICGC_MB198	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE->ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE	TRUE	4
ICGC_MB198	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH->ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE	TRUE	1
ICGC_MB205	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	FALSE	1
ICGC_MB248	ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	TRUE	1
ICGC_MB248	ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH->ON_SHARED_CHROM__OUTSIDE_TAD__HIGH_OF_BOTH	TRUE	1
ICGC_MB248	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	TRUE	1
ICGC_MB248	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE->ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE	TRUE	1
ICGC_MB248	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH->ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE	TRUE	1
ICGC_MB50	ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	FALSE	3
ICGC_MB50	ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH->ON_SHARED_CHROM__OUTSIDE_TAD__HIGH_OF_BOTH	FALSE	1
ICGC_MB50	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH->ON_SHARED_CHROM__IN_SHARED_TAD__HIGH_OF_BOTH	FALSE	1
ICGC_MB89	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE->ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE	FALSE	3
ICGC_MB89	ON_SHARED_CHROM__OUTSIDE_TAD__LOW_OF_BOTH->ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE	FALSE	1

chr8:126340062-126347674

outside gene TAD

SVs

sample_ID	position_category_SV	cis_activated_gene	n
ICGC_MB198	ON_SHARED_CHROM__IN_GENE_TAD__IN_GENE<->ON_SHARED_CHROM__IN_REG_TAD__BETWEEN	TRUE	1
ICGC_MB198	ON_SHARED_CHROM__IN_REG_TAD__BETWEEN<->ON_SHARED_CHROM__IN_GENE_TAD__IN_GENE	TRUE	1
ICGC_MB198	ON_SHARED_CHROM__IN_REG_TAD__LOW_OF_BOTH<->ON_SHARED_CHROM__IN_GENE_TAD__IN_GENE	TRUE	2

chr8:126794975-126800519

outside gene TAD

SVs

sample_ID	position_category_SV	cis_activated_gene	n
ICGC_MB198	ON_SHARED_CHROM__IN_REG_TAD__BETWEEN<->ON_SHARED_CHROM__IN_GENE_TAD__HIGH_OF_BOTH	TRUE	1
ICGC_MB248	ON_SHARED_CHROM__IN_GENE_TAD__IN_GENE<->ON_SHARED_CHROM__IN_REG_TAD__BETWEEN	TRUE	1
ICGC_MB248	ON_SHARED_CHROM__IN_REG_TAD__BETWEEN<->ON_SHARED_CHROM__IN_GENE_TAD__IN_GENE	TRUE	1
ICGC_MB50	ON_SHARED_CHROM__IN_REG_TAD__BETWEEN<->ON_SHARED_CHROM__IN_GENE_TAD__HIGH_OF_BOTH	FALSE	2

chr8:126917069-126920030

outside gene TAD

SVs

sample_ID	position_category_SV	cis_activated_gene	n
ICGC_MB198	ON_SHARED_CHROM__IN_REG_TAD__LOW_OF_BOTH<->ON_SHARED_CHROM__IN_GENE_TAD__HIGH_OF_BOTH	TRUE	1
ICGC_MB248	ON_SHARED_CHROM__IN_GENE_TAD__IN_GENE<->ON_SHARED_CHROM__IN_REG_TAD__BETWEEN	TRUE	1
ICGC_MB248	ON_SHARED_CHROM__IN_REG_TAD__BETWEEN<->ON_SHARED_CHROM__IN_GENE_TAD__IN_GENE	TRUE	1
ICGC_MB50	ON_SHARED_CHROM__IN_REG_TAD__BETWEEN<->ON_SHARED_CHROM__IN_GENE_TAD__HIGH_OF_BOTH	FALSE	2

chr8:127000725-127003108

outside gene TAD

SVs

sample_ID	position_category_SV	cis_activated_gene	n
ICGC_MB198	ON_SHARED_CHROM__IN_REG_TAD__LOW_OF_BOTH<->ON_SHARED_CHROM__IN_GENE_TAD__HIGH_OF_BOTH	TRUE	1
ICGC_MB248	ON_SHARED_CHROM__IN_GENE_TAD__IN_GENE<->ON_SHARED_CHROM__IN_REG_TAD__BETWEEN	TRUE	1
ICGC_MB248	ON_SHARED_CHROM__IN_REG_TAD__BETWEEN<->ON_SHARED_CHROM__IN_GENE_TAD__IN_GENE	TRUE	1
ICGC_MB50	ON_SHARED_CHROM__IN_REG_TAD__BETWEEN<->ON_SHARED_CHROM__IN_GENE_TAD__HIGH_OF_BOTH	FALSE	2

chr8:127527981-127532739

outside gene TAD

SVs

sample_ID	position_category_SV	cis_activated_gene	n
ICGC_MB198	ON_SHARED_CHROM__IN_REG_TAD__LOW_OF_BOTH<->ON_SHARED_CHROM__IN_GENE_TAD__HIGH_OF_BOTH	TRUE	1
ICGC_MB248	ON_SHARED_CHROM__IN_GENE_TAD__IN_GENE<->ON_SHARED_CHROM__IN_REG_TAD__BETWEEN	TRUE	1
ICGC_MB248	ON_SHARED_CHROM__IN_REG_TAD__BETWEEN<->ON_SHARED_CHROM__IN_GENE_TAD__IN_GENE	TRUE	1
ICGC_MB50	ON_SHARED_CHROM__IN_REG_TAD__BETWEEN<->ON_SHARED_CHROM__IN_GENE_TAD__HIGH_OF_BOTH	FALSE	2

chr8:127599128-127602956

outside gene TAD

SVs

sample_ID	position_category_SV	cis_activated_gene	n
ICGC_MB198	ON_SHARED_CHROM__IN_REG_TAD__LOW_OF_BOTH<->ON_SHARED_CHROM__IN_GENE_TAD__HIGH_OF_BOTH	TRUE	1
ICGC_MB248	ON_SHARED_CHROM__IN_GENE_TAD__IN_GENE<->ON_SHARED_CHROM__IN_REG_TAD__BETWEEN	TRUE	1
ICGC_MB248	ON_SHARED_CHROM__IN_REG_TAD__BETWEEN<->ON_SHARED_CHROM__IN_GENE_TAD__IN_GENE	TRUE	1
ICGC_MB50	ON_SHARED_CHROM__IN_REG_TAD__BETWEEN<->ON_SHARED_CHROM__IN_GENE_TAD__HIGH_OF_BOTH	FALSE	2

chr8:128094035-128097562

outside gene TAD

SVs

sample_ID	position_category_SV	cis_activated_gene	n
ICGC_MB198	ON_SHARED_CHROM__IN_REG_TAD__BETWEEN<->ON_SHARED_CHROM__IN_GENE_TAD__HIGH_OF_BOTH	TRUE	1
ICGC_MB198	ON_SHARED_CHROM__IN_REG_TAD__BETWEEN<->ON_SHARED_CHROM__IN_GENE_TAD__IN_GENE	TRUE	1
ICGC_MB248	ON_SHARED_CHROM__IN_REG_TAD__LOW_OF_BOTH<->ON_SHARED_CHROM__IN_GENE_TAD__HIGH_OF_BOTH	TRUE	1
ICGC_MB50	ON_SHARED_CHROM__IN_REG_TAD__BETWEEN<->ON_SHARED_CHROM__IN_GENE_TAD__HIGH_OF_BOTH	FALSE	1
ICGC_MB50	ON_SHARED_CHROM__IN_REG_TAD__LOW_OF_BOTH<->ON_SHARED_CHROM__IN_GENE_TAD__HIGH_OF_BOTH	FALSE	1

CNAs

sample_ID	position_category_CNA	cis_activated_gene	n
ICGC_MB106	ON_SHARED_CHROM__IN_REG_TAD__LOW_OF_BOTH->ON_SHARED_CHROM__IN_GENE_TAD__IN_GENE	FALSE	1
ICGC_MB248	ON_SHARED_CHROM__IN_REG_TAD__BETWEEN->ON_SHARED_CHROM__IN_GENE_TAD__IN_GENE	TRUE	1
ICGC_MB50	ON_SHARED_CHROM__IN_REG_TAD__BETWEEN->ON_SHARED_CHROM__IN_GENE_TAD__HIGH_OF_BOTH	FALSE	1

chr8:128102608-128106465

outside gene TAD

SVs

sample_ID	position_category_SV	cis_activated_gene	n
ICGC_MB198	ON_SHARED_CHROM__IN_REG_TAD__BETWEEN<->ON_SHARED_CHROM__IN_GENE_TAD__HIGH_OF_BOTH	TRUE	1
ICGC_MB198	ON_SHARED_CHROM__IN_REG_TAD__BETWEEN<->ON_SHARED_CHROM__IN_GENE_TAD__IN_GENE	TRUE	1
ICGC_MB248	ON_SHARED_CHROM__IN_REG_TAD__LOW_OF_BOTH<->ON_SHARED_CHROM__IN_GENE_TAD__HIGH_OF_BOTH	TRUE	1
ICGC_MB50	ON_SHARED_CHROM__IN_REG_TAD__BETWEEN<->ON_SHARED_CHROM__IN_GENE_TAD__HIGH_OF_BOTH	FALSE	1
ICGC_MB50	ON_SHARED_CHROM__IN_REG_TAD__LOW_OF_BOTH<->ON_SHARED_CHROM__IN_GENE_TAD__HIGH_OF_BOTH	FALSE	1

CNAs

sample_ID	position_category_CNA	cis_activated_gene	n
ICGC_MB106	ON_SHARED_CHROM__IN_REG_TAD__LOW_OF_BOTH->ON_SHARED_CHROM__IN_GENE_TAD__IN_GENE	FALSE	1
ICGC_MB248	ON_SHARED_CHROM__IN_REG_TAD__BETWEEN->ON_SHARED_CHROM__IN_GENE_TAD__IN_GENE	TRUE	1
ICGC_MB50	ON_SHARED_CHROM__IN_REG_TAD__BETWEEN->ON_SHARED_CHROM__IN_GENE_TAD__HIGH_OF_BOTH	FALSE	1

chr8:128307730-128319906

outside gene TAD

SVs

sample_ID	position_category_SV	cis_activated_gene	n
ICGC_MB198	ON_SHARED_CHROM__IN_REG_TAD__BETWEEN<->ON_SHARED_CHROM__IN_GENE_TAD__HIGH_OF_BOTH	TRUE	1
ICGC_MB198	ON_SHARED_CHROM__IN_REG_TAD__IN_REG<->ON_SHARED_CHROM__IN_GENE_TAD__IN_GENE	TRUE	1
ICGC_MB248	ON_SHARED_CHROM__IN_REG_TAD__LOW_OF_BOTH<->ON_SHARED_CHROM__IN_GENE_TAD__HIGH_OF_BOTH	TRUE	1
ICGC_MB50	ON_SHARED_CHROM__IN_REG_TAD__IN_REG<->ON_SHARED_CHROM__IN_GENE_TAD__HIGH_OF_BOTH	FALSE	1
ICGC_MB50	ON_SHARED_CHROM__IN_REG_TAD__LOW_OF_BOTH<->ON_SHARED_CHROM__IN_GENE_TAD__HIGH_OF_BOTH	FALSE	1
ICGC_MB94	ON_SHARED_CHROM__IN_REG_TAD__BETWEEN<->ON_SHARED_CHROM__IN_GENE_TAD__HIGH_OF_BOTH	FALSE	1

CNAs

sample_ID	position_category_CNA	cis_activated_gene	n
ICGC_MB106	ON_SHARED_CHROM__IN_REG_TAD__LOW_OF_BOTH->ON_SHARED_CHROM__IN_GENE_TAD__IN_GENE	FALSE	1
ICGC_MB248	ON_SHARED_CHROM__IN_REG_TAD__BETWEEN->ON_SHARED_CHROM__IN_GENE_TAD__IN_GENE	TRUE	1
ICGC_MB50	ON_SHARED_CHROM__IN_REG_TAD__IN_REG->ON_SHARED_CHROM__IN_GENE_TAD__HIGH_OF_BOTH	FALSE	1
ICGC_MB94	ON_SHARED_CHROM__IN_REG_TAD__BETWEEN->ON_SHARED_CHROM__IN_GENE_TAD__HIGH_OF_BOTH	FALSE	1

chr8:128340209-128345495

outside gene TAD

SVs

sample_ID	position_category_SV	cis_activated_gene	n
ICGC_MB198	ON_SHARED_CHROM__IN_REG_TAD__BETWEEN<->ON_SHARED_CHROM__IN_GENE_TAD__HIGH_OF_BOTH	TRUE	1
ICGC_MB198	ON_SHARED_CHROM__IN_REG_TAD__LOW_OF_BOTH<->ON_SHARED_CHROM__IN_GENE_TAD__IN_GENE	TRUE	1
ICGC_MB248	ON_SHARED_CHROM__IN_REG_TAD__LOW_OF_BOTH<->ON_SHARED_CHROM__IN_GENE_TAD__HIGH_OF_BOTH	TRUE	1
ICGC_MB50	ON_SHARED_CHROM__IN_REG_TAD__LOW_OF_BOTH<->ON_SHARED_CHROM__IN_GENE_TAD__HIGH_OF_BOTH	FALSE	2

CNAs

sample_ID	position_category_CNA	cis_activated_gene	n
ICGC_MB106	ON_SHARED_CHROM__IN_REG_TAD__LOW_OF_BOTH->ON_SHARED_CHROM__IN_GENE_TAD__IN_GENE	FALSE	1
ICGC_MB248	ON_SHARED_CHROM__IN_REG_TAD__BETWEEN->ON_SHARED_CHROM__IN_GENE_TAD__IN_GENE	TRUE	1
ICGC_MB50	ON_SHARED_CHROM__IN_REG_TAD__LOW_OF_BOTH->ON_SHARED_CHROM__IN_GENE_TAD__HIGH_OF_BOTH	FALSE	1

chr8:128360246-128369608

outside gene TAD

SVs

sample_ID	position_category_SV	cis_activated_gene	n
ICGC_MB198	ON_SHARED_CHROM__IN_REG_TAD__BETWEEN<->ON_SHARED_CHROM__IN_GENE_TAD__HIGH_OF_BOTH	TRUE	1
ICGC_MB198	ON_SHARED_CHROM__IN_REG_TAD__LOW_OF_BOTH<->ON_SHARED_CHROM__IN_GENE_TAD__IN_GENE	TRUE	1
ICGC_MB248	ON_SHARED_CHROM__IN_REG_TAD__LOW_OF_BOTH<->ON_SHARED_CHROM__IN_GENE_TAD__HIGH_OF_BOTH	TRUE	1
ICGC_MB50	ON_SHARED_CHROM__IN_REG_TAD__LOW_OF_BOTH<->ON_SHARED_CHROM__IN_GENE_TAD__HIGH_OF_BOTH	FALSE	2

CNAs

sample_ID	position_category_CNA	cis_activated_gene	n
ICGC_MB106	ON_SHARED_CHROM__IN_REG_TAD__LOW_OF_BOTH->ON_SHARED_CHROM__IN_GENE_TAD__IN_GENE	FALSE	1
ICGC_MB248	ON_SHARED_CHROM__IN_REG_TAD__BETWEEN->ON_SHARED_CHROM__IN_GENE_TAD__IN_GENE	TRUE	1
ICGC_MB50	ON_SHARED_CHROM__IN_REG_TAD__LOW_OF_BOTH->ON_SHARED_CHROM__IN_GENE_TAD__HIGH_OF_BOTH	FALSE	1

chr8:128393969-128396354

outside gene TAD

SVs

sample_ID	position_category_SV	cis_activated_gene	n
ICGC_MB198	ON_SHARED_CHROM__IN_REG_TAD__LOW_OF_BOTH<->ON_SHARED_CHROM__IN_GENE_TAD__HIGH_OF_BOTH	TRUE	1
ICGC_MB198	ON_SHARED_CHROM__IN_REG_TAD__LOW_OF_BOTH<->ON_SHARED_CHROM__IN_GENE_TAD__IN_GENE	TRUE	1
ICGC_MB248	ON_SHARED_CHROM__IN_REG_TAD__LOW_OF_BOTH<->ON_SHARED_CHROM__IN_GENE_TAD__HIGH_OF_BOTH	TRUE	1
ICGC_MB50	ON_SHARED_CHROM__IN_REG_TAD__LOW_OF_BOTH<->ON_SHARED_CHROM__IN_GENE_TAD__HIGH_OF_BOTH	FALSE	2

CNAs

sample_ID	position_category_CNA	cis_activated_gene	n
ICGC_MB106	ON_SHARED_CHROM__IN_REG_TAD__LOW_OF_BOTH->ON_SHARED_CHROM__IN_GENE_TAD__IN_GENE	FALSE	1
ICGC_MB248	ON_SHARED_CHROM__IN_REG_TAD__BETWEEN->ON_SHARED_CHROM__IN_GENE_TAD__IN_GENE	TRUE	1
ICGC_MB50	ON_SHARED_CHROM__IN_REG_TAD__LOW_OF_BOTH->ON_SHARED_CHROM__IN_GENE_TAD__HIGH_OF_BOTH	FALSE	1

chr8:128407668-128411656

outside gene TAD

SVs

sample_ID	position_category_SV	cis_activated_gene	n
ICGC_MB198	ON_SHARED_CHROM__IN_REG_TAD__LOW_OF_BOTH<->ON_SHARED_CHROM__IN_GENE_TAD__HIGH_OF_BOTH	TRUE	1
ICGC_MB198	ON_SHARED_CHROM__IN_REG_TAD__LOW_OF_BOTH<->ON_SHARED_CHROM__IN_GENE_TAD__IN_GENE	TRUE	1
ICGC_MB248	ON_SHARED_CHROM__IN_REG_TAD__LOW_OF_BOTH<->ON_SHARED_CHROM__IN_GENE_TAD__HIGH_OF_BOTH	TRUE	1
ICGC_MB50	ON_SHARED_CHROM__IN_REG_TAD__LOW_OF_BOTH<->ON_SHARED_CHROM__IN_GENE_TAD__HIGH_OF_BOTH	FALSE	2

CNAs

sample_ID	position_category_CNA	cis_activated_gene	n
ICGC_MB106	ON_SHARED_CHROM__IN_REG_TAD__LOW_OF_BOTH->ON_SHARED_CHROM__IN_GENE_TAD__IN_GENE	FALSE	1
ICGC_MB248	ON_SHARED_CHROM__IN_REG_TAD__BETWEEN->ON_SHARED_CHROM__IN_GENE_TAD__IN_GENE	TRUE	1
ICGC_MB50	ON_SHARED_CHROM__IN_REG_TAD__LOW_OF_BOTH->ON_SHARED_CHROM__IN_GENE_TAD__HIGH_OF_BOTH	FALSE	1

chr8:128446110-128449933

outside gene TAD

SVs

sample_ID	position_category_SV	cis_activated_gene	n
ICGC_MB198	ON_SHARED_CHROM__IN_REG_TAD__LOW_OF_BOTH<->ON_SHARED_CHROM__IN_GENE_TAD__HIGH_OF_BOTH	TRUE	1
ICGC_MB198	ON_SHARED_CHROM__IN_REG_TAD__LOW_OF_BOTH<->ON_SHARED_CHROM__IN_GENE_TAD__IN_GENE	TRUE	1
ICGC_MB248	ON_SHARED_CHROM__IN_REG_TAD__LOW_OF_BOTH<->ON_SHARED_CHROM__IN_GENE_TAD__HIGH_OF_BOTH	TRUE	1
ICGC_MB50	ON_SHARED_CHROM__IN_REG_TAD__LOW_OF_BOTH<->ON_SHARED_CHROM__IN_GENE_TAD__HIGH_OF_BOTH	FALSE	2

CNAs

sample_ID	position_category_CNA	cis_activated_gene	n
ICGC_MB106	ON_SHARED_CHROM__IN_REG_TAD__LOW_OF_BOTH->ON_SHARED_CHROM__IN_GENE_TAD__IN_GENE	FALSE	1
ICGC_MB248	ON_SHARED_CHROM__IN_REG_TAD__BETWEEN->ON_SHARED_CHROM__IN_GENE_TAD__IN_GENE	TRUE	1
ICGC_MB50	ON_SHARED_CHROM__IN_REG_TAD__LOW_OF_BOTH->ON_SHARED_CHROM__IN_GENE_TAD__HIGH_OF_BOTH	FALSE	1

chr8:128577496-128581841

outside gene TAD

SVs

sample_ID	position_category_SV	cis_activated_gene	n
ICGC_MB198	ON_SHARED_CHROM__IN_REG_TAD__LOW_OF_BOTH<->ON_SHARED_CHROM__IN_GENE_TAD__HIGH_OF_BOTH	TRUE	1
ICGC_MB198	ON_SHARED_CHROM__IN_REG_TAD__LOW_OF_BOTH<->ON_SHARED_CHROM__IN_GENE_TAD__IN_GENE	TRUE	1
ICGC_MB248	ON_SHARED_CHROM__IN_REG_TAD__LOW_OF_BOTH<->ON_SHARED_CHROM__IN_GENE_TAD__HIGH_OF_BOTH	TRUE	1
ICGC_MB50	ON_SHARED_CHROM__IN_REG_TAD__LOW_OF_BOTH<->ON_SHARED_CHROM__IN_GENE_TAD__HIGH_OF_BOTH	FALSE	2

CNAs

sample_ID	position_category_CNA	cis_activated_gene	n
ICGC_MB106	ON_SHARED_CHROM__IN_REG_TAD__LOW_OF_BOTH->ON_SHARED_CHROM__IN_GENE_TAD__IN_GENE	FALSE	1
ICGC_MB248	ON_SHARED_CHROM__IN_REG_TAD__BETWEEN->ON_SHARED_CHROM__IN_GENE_TAD__IN_GENE	TRUE	1
ICGC_MB50	ON_SHARED_CHROM__IN_REG_TAD__LOW_OF_BOTH->ON_SHARED_CHROM__IN_GENE_TAD__HIGH_OF_BOTH	FALSE	1

chr8:128585136-128589979

outside gene TAD

SVs

sample_ID	position_category_SV	cis_activated_gene	n
ICGC_MB198	ON_SHARED_CHROM__IN_REG_TAD__LOW_OF_BOTH<->ON_SHARED_CHROM__IN_GENE_TAD__HIGH_OF_BOTH	TRUE	1
ICGC_MB198	ON_SHARED_CHROM__IN_REG_TAD__LOW_OF_BOTH<->ON_SHARED_CHROM__IN_GENE_TAD__IN_GENE	TRUE	1
ICGC_MB248	ON_SHARED_CHROM__IN_REG_TAD__LOW_OF_BOTH<->ON_SHARED_CHROM__IN_GENE_TAD__HIGH_OF_BOTH	TRUE	1
ICGC_MB50	ON_SHARED_CHROM__IN_REG_TAD__LOW_OF_BOTH<->ON_SHARED_CHROM__IN_GENE_TAD__HIGH_OF_BOTH	FALSE	2

CNAs

sample_ID	position_category_CNA	cis_activated_gene	n
ICGC_MB106	ON_SHARED_CHROM__IN_REG_TAD__LOW_OF_BOTH->ON_SHARED_CHROM__IN_GENE_TAD__IN_GENE	FALSE	1
ICGC_MB248	ON_SHARED_CHROM__IN_REG_TAD__BETWEEN->ON_SHARED_CHROM__IN_GENE_TAD__IN_GENE	TRUE	1
ICGC_MB50	ON_SHARED_CHROM__IN_REG_TAD__LOW_OF_BOTH->ON_SHARED_CHROM__IN_GENE_TAD__HIGH_OF_BOTH	FALSE	1

chr8:128592485-128599642

outside gene TAD

SVs

sample_ID	position_category_SV	cis_activated_gene	n
ICGC_MB198	ON_SHARED_CHROM__IN_REG_TAD__LOW_OF_BOTH<->ON_SHARED_CHROM__IN_GENE_TAD__HIGH_OF_BOTH	TRUE	1
ICGC_MB198	ON_SHARED_CHROM__IN_REG_TAD__LOW_OF_BOTH<->ON_SHARED_CHROM__IN_GENE_TAD__IN_GENE	TRUE	1
ICGC_MB248	ON_SHARED_CHROM__IN_REG_TAD__LOW_OF_BOTH<->ON_SHARED_CHROM__IN_GENE_TAD__HIGH_OF_BOTH	TRUE	1
ICGC_MB50	ON_SHARED_CHROM__IN_REG_TAD__LOW_OF_BOTH<->ON_SHARED_CHROM__IN_GENE_TAD__HIGH_OF_BOTH	FALSE	2

CNAs

sample_ID	position_category_CNA	cis_activated_gene	n
ICGC_MB106	ON_SHARED_CHROM__IN_REG_TAD__LOW_OF_BOTH->ON_SHARED_CHROM__IN_GENE_TAD__IN_GENE	FALSE	1
ICGC_MB248	ON_SHARED_CHROM__IN_REG_TAD__BETWEEN->ON_SHARED_CHROM__IN_GENE_TAD__IN_GENE	TRUE	1
ICGC_MB50	ON_SHARED_CHROM__IN_REG_TAD__LOW_OF_BOTH->ON_SHARED_CHROM__IN_GENE_TAD__HIGH_OF_BOTH	FALSE	1

chr8:128649032-128667279

outside gene TAD

SVs

sample_ID	position_category_SV	cis_activated_gene	n
ICGC_MB198	ON_SHARED_CHROM__IN_REG_TAD__LOW_OF_BOTH<->ON_SHARED_CHROM__IN_GENE_TAD__HIGH_OF_BOTH	TRUE	1
ICGC_MB198	ON_SHARED_CHROM__IN_REG_TAD__LOW_OF_BOTH<->ON_SHARED_CHROM__IN_GENE_TAD__IN_GENE	TRUE	1
ICGC_MB248	ON_SHARED_CHROM__IN_REG_TAD__LOW_OF_BOTH<->ON_SHARED_CHROM__IN_GENE_TAD__HIGH_OF_BOTH	TRUE	1
ICGC_MB50	ON_SHARED_CHROM__IN_REG_TAD__LOW_OF_BOTH<->ON_SHARED_CHROM__IN_GENE_TAD__HIGH_OF_BOTH	FALSE	2
ICGC_MB94	ON_SHARED_CHROM__IN_REG_TAD__LOW_OF_BOTH<->ON_SHARED_CHROM__IN_GENE_TAD__HIGH_OF_BOTH	FALSE	1

CNAs

sample_ID	position_category_CNA	cis_activated_gene	n
ICGC_MB106	ON_SHARED_CHROM__IN_REG_TAD__LOW_OF_BOTH->ON_SHARED_CHROM__IN_GENE_TAD__IN_GENE	FALSE	1
ICGC_MB248	ON_SHARED_CHROM__IN_REG_TAD__BETWEEN->ON_SHARED_CHROM__IN_GENE_TAD__IN_GENE	TRUE	1
ICGC_MB50	ON_SHARED_CHROM__IN_REG_TAD__LOW_OF_BOTH->ON_SHARED_CHROM__IN_GENE_TAD__HIGH_OF_BOTH	FALSE	1
ICGC_MB94	ON_SHARED_CHROM__IN_REG_TAD__LOW_OF_BOTH->ON_SHARED_CHROM__IN_GENE_TAD__HIGH_OF_BOTH	FALSE	1

chr8:82807156-82809909

outside gene TAD

SVs

sample_ID	position_category_SV	cis_activated_gene	n
ICGC_MB205	ON_SHARED_CHROM__IN_REG_TAD__BETWEEN<->ON_SHARED_CHROM__IN_GENE_TAD__HIGH_OF_BOTH	FALSE	1
ICGC_MB89	ON_SHARED_CHROM__IN_GENE_TAD__IN_GENE<->ON_SHARED_CHROM__IN_REG_TAD__BETWEEN	FALSE	1
ICGC_MB89	ON_SHARED_CHROM__IN_REG_TAD__BETWEEN<->ON_SHARED_CHROM__IN_GENE_TAD__IN_GENE	FALSE	1

CNAs

sample_ID	position_category_CNA	cis_activated_gene	n
ICGC_MB205	ON_SHARED_CHROM__IN_REG_TAD__BETWEEN->ON_SHARED_CHROM__IN_GENE_TAD__HIGH_OF_BOTH	FALSE	1

chr8:82837661-82841382

outside gene TAD

SVs

sample_ID	position_category_SV	cis_activated_gene	n
ICGC_MB205	ON_SHARED_CHROM__IN_REG_TAD__BETWEEN<->ON_SHARED_CHROM__IN_GENE_TAD__HIGH_OF_BOTH	FALSE	1
ICGC_MB89	ON_SHARED_CHROM__IN_GENE_TAD__IN_GENE<->ON_SHARED_CHROM__IN_REG_TAD__BETWEEN	FALSE	1
ICGC_MB89	ON_SHARED_CHROM__IN_REG_TAD__BETWEEN<->ON_SHARED_CHROM__IN_GENE_TAD__IN_GENE	FALSE	1

CNAs

sample_ID	position_category_CNA	cis_activated_gene	n
ICGC_MB205	ON_SHARED_CHROM__IN_REG_TAD__BETWEEN->ON_SHARED_CHROM__IN_GENE_TAD__HIGH_OF_BOTH	FALSE	1

chr8:83329079-83331752

outside gene TAD

SVs

sample_ID	position_category_SV	cis_activated_gene	n
ICGC_MB205	ON_SHARED_CHROM__IN_REG_TAD__BETWEEN<->ON_SHARED_CHROM__IN_GENE_TAD__HIGH_OF_BOTH	FALSE	1
ICGC_MB89	ON_SHARED_CHROM__IN_GENE_TAD__IN_GENE<->ON_SHARED_CHROM__IN_REG_TAD__BETWEEN	FALSE	1
ICGC_MB89	ON_SHARED_CHROM__IN_REG_TAD__BETWEEN<->ON_SHARED_CHROM__IN_GENE_TAD__IN_GENE	FALSE	1

CNAs

sample_ID	position_category_CNA	cis_activated_gene	n
ICGC_MB205	ON_SHARED_CHROM__IN_REG_TAD__BETWEEN->ON_SHARED_CHROM__IN_GENE_TAD__HIGH_OF_BOTH	FALSE	1

chr8:83700078-83704934

outside gene TAD

SVs

sample_ID	position_category_SV	cis_activated_gene	n
ICGC_MB205	ON_SHARED_CHROM__IN_REG_TAD__LOW_OF_BOTH<->ON_SHARED_CHROM__IN_GENE_TAD__HIGH_OF_BOTH	FALSE	1
ICGC_MB89	ON_SHARED_CHROM__IN_GENE_TAD__IN_GENE<->ON_SHARED_CHROM__IN_REG_TAD__BETWEEN	FALSE	1
ICGC_MB89	ON_SHARED_CHROM__IN_REG_TAD__BETWEEN<->ON_SHARED_CHROM__IN_GENE_TAD__IN_GENE	FALSE	1

CNAs

sample_ID	position_category_CNA	cis_activated_gene	n
ICGC_MB205	ON_SHARED_CHROM__IN_REG_TAD__LOW_OF_BOTH->ON_SHARED_CHROM__IN_GENE_TAD__HIGH_OF_BOTH	FALSE	1

chr8:83739669-83766814

outside gene TAD

SVs

sample_ID	position_category_SV	cis_activated_gene	n
ICGC_MB205	ON_SHARED_CHROM__IN_REG_TAD__LOW_OF_BOTH<->ON_SHARED_CHROM__IN_GENE_TAD__HIGH_OF_BOTH	FALSE	1
ICGC_MB89	ON_SHARED_CHROM__IN_GENE_TAD__IN_GENE<->ON_SHARED_CHROM__IN_REG_TAD__IN_REG	FALSE	1
ICGC_MB89	ON_SHARED_CHROM__IN_REG_TAD__IN_REG<->ON_SHARED_CHROM__IN_GENE_TAD__IN_GENE	FALSE	1

CNAs

sample_ID	position_category_CNA	cis_activated_gene	n
ICGC_MB205	ON_SHARED_CHROM__IN_REG_TAD__LOW_OF_BOTH->ON_SHARED_CHROM__IN_GENE_TAD__HIGH_OF_BOTH	FALSE	1

chr8:137163061-137165345

outside gene TAD

SVs

sample_ID	position_category_SV	cis_activated_gene	n
ICGC_MB248	ON_SHARED_CHROM__IN_GENE_TAD__BETWEEN<->ON_SHARED_CHROM__IN_REG_TAD__HIGH_OF_BOTH	TRUE	1

chr8:137277922-137281370

outside gene TAD

SVs

sample_ID	position_category_SV	cis_activated_gene	n
ICGC_MB248	ON_SHARED_CHROM__IN_GENE_TAD__BETWEEN<->ON_SHARED_CHROM__IN_REG_TAD__HIGH_OF_BOTH	TRUE	1

chr8:137463963-137465534

outside gene TAD

SVs

sample_ID	position_category_SV	cis_activated_gene	n
ICGC_MB248	ON_SHARED_CHROM__IN_GENE_TAD__BETWEEN<->ON_SHARED_CHROM__IN_REG_TAD__HIGH_OF_BOTH	TRUE	1

chr8:137483830-137495649

outside gene TAD

SVs

sample_ID	position_category_SV	cis_activated_gene	n
ICGC_MB248	ON_SHARED_CHROM__IN_GENE_TAD__BETWEEN<->ON_SHARED_CHROM__IN_REG_TAD__HIGH_OF_BOTH	TRUE	1

chr8:137525703-137533506

outside gene TAD

SVs

sample_ID	position_category_SV	cis_activated_gene	n
ICGC_MB248	ON_SHARED_CHROM__IN_GENE_TAD__BETWEEN<->ON_SHARED_CHROM__IN_REG_TAD__HIGH_OF_BOTH	TRUE	1

chr8:137617637-137620220

outside gene TAD

SVs

sample_ID	position_category_SV	cis_activated_gene	n
ICGC_MB248	ON_SHARED_CHROM__IN_GENE_TAD__BETWEEN<->ON_SHARED_CHROM__IN_REG_TAD__BETWEEN	TRUE	1

chr8:137628117-137633834

outside gene TAD

SVs

sample_ID	position_category_SV	cis_activated_gene	n
ICGC_MB248	ON_SHARED_CHROM__IN_GENE_TAD__BETWEEN<->ON_SHARED_CHROM__IN_REG_TAD__BETWEEN	TRUE	1

chr8:84490859-84495622

outside gene TAD

SVs

sample_ID	position_category_SV	cis_activated_gene	n
ICGC_MB89	ON_SHARED_CHROM__IN_REG_TAD__LOW_OF_BOTH<->ON_SHARED_CHROM__IN_GENE_TAD__IN_GENE	FALSE	1

chr8:84732264-84733699

outside gene TAD

SVs

sample_ID	position_category_SV	cis_activated_gene	n
ICGC_MB89	ON_SHARED_CHROM__IN_REG_TAD__LOW_OF_BOTH<->ON_SHARED_CHROM__IN_GENE_TAD__IN_GENE	FALSE	1

chr8:128839004-128840851

within gene TAD

CNAs

sample_ID	position_category_CNA	cis_activated_gene	n
ICGC_MB62	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE->ON_SHARED_CHROM__OUTSIDE_TAD__HIGH_OF_BOTH	FALSE	1

chr8:128929227-128931079

within gene TAD

CNAs

sample_ID	position_category_CNA	cis_activated_gene	n
ICGC_MB62	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE->ON_SHARED_CHROM__OUTSIDE_TAD__HIGH_OF_BOTH	FALSE	1

chr8:129163664-129167624

within gene TAD

CNAs

sample_ID	position_category_CNA	cis_activated_gene	n
ICGC_MB62	ON_SHARED_CHROM__IN_SHARED_TAD__IN_GENE->ON_SHARED_CHROM__OUTSIDE_TAD__HIGH_OF_BOTH	FALSE	1

chr8:132050099-132057182

outside gene TAD

CNAs

sample_ID	position_category_CNA	cis_activated_gene	n
ICGC_MB62	ON_SHARED_CHROM__IN_GENE_TAD__IN_GENE->ON_SHARED_CHROM__IN_REG_TAD__HIGH_OF_BOTH	FALSE	1

chr8:132062273-132066341

outside gene TAD

CNAs

sample_ID	position_category_CNA	cis_activated_gene	n
ICGC_MB62	ON_SHARED_CHROM__IN_GENE_TAD__IN_GENE->ON_SHARED_CHROM__IN_REG_TAD__HIGH_OF_BOTH	FALSE	1

chr8:132131981-132136331

outside gene TAD

CNAs

sample_ID	position_category_CNA	cis_activated_gene	n
ICGC_MB62	ON_SHARED_CHROM__IN_GENE_TAD__IN_GENE->ON_SHARED_CHROM__IN_REG_TAD__HIGH_OF_BOTH	FALSE	1

ICGC_MB198cis-activatedSVs/CNAs

IGV

General

sample_id	subgroup	FPKM	n_markers	n_ASE_markers	n_cnv_markers	p_all	delta_abs_all	copynumber_tag_all	combined_p_value	mean_delta_abs	ABH	ASE_marker_run_overlap	passed_FPKM_filter	passed_ASE_filter	ASE_filter_rescued_oncogene	passed_mean_delta_abs_filter	OHE_used_reference	OHE_used_pvalue	passed_OHE_filter	cis_activated_gene
ICGC_MB198	group_3	8.49	48	23	48	0.00811201204096523,0.0325972256530933,0.0284660730094864,0.0267185262056345,0.0300055656708636,0.0713629727507365,0.0701496436885295,0.0208930966470933,0.191589699038394,0.0953170490210763,0.0305855308598147,0.0627232169748562,0.100749294996267,0.081762435769978,0.0518616724489658,0.039196714668806,0.0225952945656859,0.0249333920874806,0.0403144752680697,0.0301344184371902,0.538627489681865,0.028596353129872,0.0180135438109811,0.0821893779633435,0.0126003023884999,0.0819624194862463,0.0148136706386065,0.00605011668129911,0.00503073243121254,0.0430922337099234,0.30294200049669,0.126509415420681,0.0324760225581977,0.00898682896679125,0.0248518754960327,0.0149043119674116,0.00218006666693584,0.0130574505205004,0.0128769875737638,0.0260796424839572,0.00600358813260075,0.105442736639748,0.0421321310031256,0.317607364511941,0.0186323820244562,0.012229410909195,0.0277598106326621,0.00547088572701271	0.338235294117647,0.315789473684211,0.337837837837838,0.356164383561644,0.303370786516854,0.214118747078074,0.26530612244898,0.281567489114659,0.172932330827068,0.237213403880071,0.266866566716642,0.285714285714286,0.231942215088282,0.285902503293808,0.302387267904509,0.301075268817204,0.333333333333333,0.377358490566038,0.233834586466165,0.36144578313253,0.0331550802139038,0.309597523219814,0.323076923076923,0.203767123287671,0.346153846153846,0.222861842105263,0.328358208955224,0.32,0.281410256410256,0.330097087378641,0.136363636363636,0.253658536585366,0.327272727272727,0.328421052631579,0.235338345864662,0.263888888888889,0.346666666666667,0.282810428634556,0.283531409168082,0.277034559643255,0.333333333333333,0.236802413273001,0.348837209302326,0.137837837837838,0.384615384615385,0.365853658536585,0.309090909090909,0.249141150112024	cnv,cnv,cnv,cnv,cnv,cnv,cnv,cnv,cnv,cnv,cnv,cnv,cnv,cnv,cnv,cnv,cnv,cnv,cnv,cnv,cnv,cnv,cnv,cnv,cnv,cnv,cnv,cnv,cnv,cnv,cnv,cnv,cnv,cnv,cnv,cnv,cnv,cnv,cnv,cnv,cnv,cnv,cnv,cnv,cnv,cnv,cnv,cnv	0.0318193	0.2833619	0.4777835	TRUE	TRUE	FALSE	FALSE	TRUE	ref_filtered	0	TRUE	TRUE

Mutation Counts

Variant Type	n matched via gene TAD	n matched via GeneHancer	n affecting ChIPSeq	total
SVs	10	10	10	10
CNAs	9	9	9	9
somatic SNVs/InDels	1	0	0	1
relevant somatic SNVs/InDels	1	0	-	-
all Mutations	20	19	-	20

SVs

sv_break1_chrom	sv_break1_pos	sv_break2_chrom	sv_break2_pos	sv_type	eventInversion
chr8	128889000	chr8	128889361	DEL	NORMAL
chr8	128891501	chr8	126592516	DUP	NORMAL
chr8	126055077	chr8	129326789	DUP	NORMAL
chr8	126219824	chr8	128897202	INV	INV
chr8	126219900	chr8	128897202	INV	INV
chr8	126592516	chr8	128891503	DUP	NORMAL
chr8	126783086	chr8	129301180	DUP	NORMAL
chr8	126840132	chr8	129141194	DUP	NORMAL
chr8	128312960	chr8	128828625	DUP	NORMAL
chr8	128372867	chr8	129215568	DUP	NORMAL

CNAs

cna_chrom	cna_start	cna_end	copy_number	CNA_type	log2
chr8	128828626	128891501	3.991064	DUP	NA
chr8	128891502	128891503	0.000000	HomoDel	NA
chr8	128891504	128897202	3.253712	DUP	NA
chr8	128897203	128899963	3.253712	DUP	NA
chr8	128899963	129141194	3.759910	DUP	NA
chr8	129141195	129215568	3.456233	DUP	NA
chr8	129215569	129301180	3.297602	DUP	NA
chr8	129301181	129326789	2.994953	DUP	NA
chr8	128763666	128828625	4.103715	DUP	NA

Somatic SNVs

snv_chrom	snv_pos	ref	alt
chr8	129052917	G	A

ICGC_MB248cis-activatedSVs/CNAs

IGV

General

sample_id	subgroup	FPKM	n_markers	n_ASE_markers	n_cnv_markers	p_all	delta_abs_all	copynumber_tag_all	combined_p_value	mean_delta_abs	ABH	ASE_marker_run_overlap	passed_FPKM_filter	passed_ASE_filter	ASE_filter_rescued_oncogene	passed_mean_delta_abs_filter	OHE_used_reference	OHE_used_pvalue	passed_OHE_filter	cis_activated_gene
ICGC_MB248	group_3	11.91	58	33	58	0.000758724036513205,0.00522946948375144,0.257927256665092,0.0111175764925525,0.0394593834119703,0.0160696571700307,0.0733756982483845,0.0123444289168811,0.0535486259066061,0.00429521395382512,0.00311404012808868,0.0188785784898348,0.0211790444508851,0.605450592875789,0.00427467727499609,0.0418699914523762,0.00264696487749701,0.0223975870522756,0.0072722681588452,0.284919978291923,0.00554176414997709,0.1379386211254,4.41099116059272e-05,0.00129903434648131,0.00162019152759084,0.00366533992382415,0.0283192415580785,0.0314736983600371,0.00480401181970822,0.00507303565538782,0.00500398876265747,0.0598152763930032,0.0272788322130174,0.133696204154218,0.390781417710882,0.095156363402875,0.0036575611627669,0.072249774502745,0.00169912673552701,0.0198593020895819,0.0243177625715144,0.224350932259458,0.0920950562568729,0.0344178973726564,0.0100439598366363,0.00328210761385678,0.00520492727141701,0.0111536104914887,0.12459098434776,0.131860069929007,0.427620170028883,0.0524845811172025,0.0215480398032564,0.0703041403280631,0.427579605054052,0.516440013173806,0.199730105781722,0.586421953008455	0.367909867909868,0.382154882154882,0.171153846153846,0.460674157303371,0.249823570924488,0.34625322997416,0.318248175182482,0.35,0.332674571805007,0.455223880597015,0.418367346938776,0.374789915966387,0.387931034482759,0,0.404672897196262,0.198292082790563,0.464381720430108,0.369505494505495,0.19476902173913,0.129251700680272,0.462645268400664,0.218992248062016,0.546666666666667,0.6,0.457572502685285,0.43612596553773,0.317135549872123,0.309703368526898,0.520325203252033,0.46790450928382,0.43298969072165,0.30952380952381,0.342364532019704,0.243939393939394,0.0658415841584159,0.250517598343685,0.404761904761905,0.28393665158371,0.455304928989139,0.360337552742616,0.357142857142857,0.189380530973451,0.244444444444444,0.321212121212121,0.447761194029851,0.522727272727273,0.466384009691096,0.450757575757576,0.208896396396396,0.245454545454545,0.084375,0.333041958041958,0.316666666666667,0.322388059701492,0.0631578947368421,0.0316122233930453,0.206493506493506,0.00909090909090909	cnv,cnv,cnv,cnv,cnv,cnv,cnv,cnv,cnv,cnv,cnv,cnv,cnv,cnv,cnv,cnv,cnv,cnv,cnv,cnv,cnv,cnv,cnv,cnv,cnv,cnv,cnv,cnv,cnv,cnv,cnv,cnv,cnv,cnv,cnv,cnv,cnv,cnv,cnv,cnv,cnv,cnv,cnv,cnv,cnv,cnv,cnv,cnv,cnv,cnv,cnv,cnv,cnv,cnv,cnv,cnv,cnv,cnv	0.0233741	0.322132	0.3136385	TRUE	TRUE	FALSE	FALSE	TRUE	ref_filtered	0	TRUE	TRUE

Mutation Counts

Variant Type	n matched via gene TAD	n matched via GeneHancer	n affecting ChIPSeq	total
SVs	4	4	4	4
CNAs	5	5	5	5
somatic SNVs/InDels	2	0	0	2
relevant somatic SNVs/InDels	2	0	-	-
all Mutations	11	9	-	11

SVs

sv_break1_chrom	sv_break1_pos	sv_break2_chrom	sv_break2_pos	sv_type	eventInversion
chr8	129021551	chr8	127751802	TRA	NORMAL
chr8	129191958	chr8	137554767	INV	INV
chr8	127751802	chr8	129021762	DUP	NORMAL
chr8	127936050	chr8	129309391	DUP	NORMAL

CNAs

cna_chrom	cna_start	cna_end	copy_number	CNA_type	log2
chr8	129021552	129021762	5.837052	DUP	NA
chr8	129021763	129191958	5.637471	DUP	NA
chr8	129191959	129309391	5.094108	DUP	NA
chr8	129309392	129841684	4.591002	DUP	NA
chr8	128678094	129021551	6.737829	DUP	NA

Somatic SNVs

snv_chrom	snv_pos	ref	alt
chr8	129158017	G	T
chr8	129293087	T	C

ICGC_MB62SVs/CNAs

IGV

General

sample_id	subgroup	FPKM	n_markers	n_ASE_markers	n_cnv_markers	p_all	delta_abs_all	copynumber_tag_all	combined_p_value	mean_delta_abs	ABH	ASE_marker_run_overlap	passed_FPKM_filter	passed_ASE_filter	ASE_filter_rescued_oncogene	passed_mean_delta_abs_filter	OHE_used_reference	OHE_used_pvalue	passed_OHE_filter	cis_activated_gene
ICGC_MB62	SHH	0.56	1	0	1	0.204334277954512	0.14375	cnv	0.2043343	0.14375	0.2952162	FALSE	FALSE	FALSE	FALSE	FALSE	ref_filtered	0.7905052	FALSE	FALSE

Mutation Counts

Variant Type	n matched via gene TAD	n matched via GeneHancer	n affecting ChIPSeq	total
SVs	0	0	0	0
CNAs	1	1	1	1
somatic SNVs/InDels	5	0	0	5
relevant somatic SNVs/InDels	0	0	-	-
all Mutations	6	1	-	6

CNAs

cna_chrom	cna_start	cna_end	copy_number	CNA_type	log2
chr8	128920053	133040016	3.994831	DUP	NA

Somatic SNVs

snv_chrom	snv_pos	ref	alt
chr8	129324103	G	T
chr8	129335795	G	T
chr8	129356183	G	A
chr8	129489020	G	T
chr8	129489229	G	T

ICGC_MB106SVs/CNAs

IGV

General

sample_id	subgroup	FPKM	n_markers	n_ASE_markers	n_cnv_markers	p_all	delta_abs_all	copynumber_tag_all	combined_p_value	mean_delta_abs	ABH	ASE_marker_run_overlap	passed_FPKM_filter	passed_ASE_filter	ASE_filter_rescued_oncogene	passed_mean_delta_abs_filter	OHE_used_reference	OHE_used_pvalue	passed_OHE_filter	cis_activated_gene
ICGC_MB106	group_3	2.48	1	0	1	0.464964837665947	0.0587121212121212	cnv	0.4649648	0.0587121	0.4989953	FALSE	FALSE	FALSE	FALSE	FALSE	ref_filtered	1.64e-05	TRUE	FALSE

Mutation Counts

Variant Type	n matched via gene TAD	n matched via GeneHancer	n affecting ChIPSeq	total
SVs	3	3	3	3
CNAs	3	3	3	3
somatic SNVs/InDels	1	0	0	1
relevant somatic SNVs/InDels	0	0	-	-
all Mutations	7	6	-	7

SVs

sv_break1_chrom	sv_break1_pos	sv_break2_chrom	sv_break2_pos	sv_type	eventInversion
chr8	128830553	chr8	128830582	INV	INV
chr8	128830553	chr8	144596459	INV	INV
chr8	128830582	chr8	144596459	TRA	NORMAL

CNAs

cna_chrom	cna_start	cna_end	copy_number	CNA_type	log2
chr8	128830554	128830582	0.000000	HomoDel	NA
chr8	128830583	142403555	5.111964	DUP	NA
chr8	127960646	128830553	8.030844	DUP	NA

Somatic SNVs

snv_chrom	snv_pos	ref	alt
chr8	129340553	A	G

ICGC_MB205SVs/CNAs

IGV

General

sample_id	subgroup	FPKM	n_markers	n_ASE_markers	n_cnv_markers	p_all	delta_abs_all	copynumber_tag_all	combined_p_value	mean_delta_abs	ABH	ASE_marker_run_overlap	passed_FPKM_filter	passed_ASE_filter	ASE_filter_rescued_oncogene	passed_mean_delta_abs_filter	OHE_used_reference	OHE_used_pvalue	passed_OHE_filter	cis_activated_gene
ICGC_MB205	group_3	1.04	1	0	1	0.130987681903719	0.244107744107744	cnv	0.1309877	0.2441077	0.4682759	FALSE	FALSE	FALSE	FALSE	TRUE	ref_filtered	0.0324713	TRUE	FALSE

Mutation Counts

Variant Type	n matched via gene TAD	n matched via GeneHancer	n affecting ChIPSeq	total
SVs	1	1	1	1
CNAs	1	1	1	1
somatic SNVs/InDels	1	0	0	1
relevant somatic SNVs/InDels	0	0	-	-
all Mutations	3	2	-	3

SVs

sv_break1_chrom	sv_break1_pos	sv_break2_chrom	sv_break2_pos	sv_type	eventInversion
chr8	83547721	chr8	129383567	DUP	NORMAL

CNAs

cna_chrom	cna_start	cna_end	copy_number	CNA_type	log2
chr8	83549992	129379931	2.990796	DUP	NA

Somatic SNVs

snv_chrom	snv_pos	ref	alt
chr8	128916601	G	T

ICGC_MB50SVs/CNAs

IGV

General

sample_id	subgroup	FPKM	n_markers	n_ASE_markers	n_cnv_markers	p_all	delta_abs_all	copynumber_tag_all	combined_p_value	mean_delta_abs	ABH	ASE_marker_run_overlap	passed_FPKM_filter	passed_ASE_filter	ASE_filter_rescued_oncogene	passed_mean_delta_abs_filter	OHE_used_reference	OHE_used_pvalue	passed_OHE_filter	cis_activated_gene
ICGC_MB50	group_3	31.76	4	3	4	0.402401465057235,0.00277584453287848,0.0121400942625295,0.0121225863573795	0.0537931034482759,0.555555555555556,0.345238095238095,0.338383838383838	cnv,cnv,cnv,cnv	0.0201358	0.3232426	0.2034964	FALSE	TRUE	FALSE	FALSE	TRUE	ref_filtered	0	TRUE	FALSE

Mutation Counts

Variant Type	n matched via gene TAD	n matched via GeneHancer	n affecting ChIPSeq	total
SVs	4	4	4	4
CNAs	5	5	5	5
somatic SNVs/InDels	5	0	0	5
relevant somatic SNVs/InDels	0	0	-	-
all Mutations	14	9	-	14

SVs

sv_break1_chrom	sv_break1_pos	sv_break2_chrom	sv_break2_pos	sv_type	eventInversion
chr8	127749912	chr8	129584736	INV	INV
chr8	127751066	chr8	129586134	INV	INV
chr8	127942735	chr8	129534901	INV	INV
chr8	128315464	chr8	129263061	DUP	NORMAL

CNAs

cna_chrom	cna_start	cna_end	copy_number	CNA_type	log2
chr8	129263062	129534901	109.29843	DUP	NA
chr8	129534902	129584736	95.64196	DUP	NA
chr8	129584737	129586134	74.92488	DUP	NA
chr8	129586135	129676540	77.00363	DUP	NA
chr8	128315465	129263061	93.25519	DUP	NA

Somatic SNVs

snv_chrom	snv_pos	ref	alt
chr8	128801067	T	C
chr8	128934734	C	A
chr8	128934855	C	G
chr8	129082136	C	G
chr8	129428401	C	G

ICGC_MB89SVs/CNAs

IGV

General

sample_id	subgroup	FPKM	n_markers	n_ASE_markers	n_cnv_markers	p_all	delta_abs_all	copynumber_tag_all	combined_p_value	mean_delta_abs	ABH	ASE_marker_run_overlap	passed_FPKM_filter	passed_ASE_filter	ASE_filter_rescued_oncogene	passed_mean_delta_abs_filter	OHE_used_reference	OHE_used_pvalue	passed_OHE_filter	cis_activated_gene
ICGC_MB89	group_3	28.89	7	1	0	0.500000000128087,0.209802362270707,0.236051606478728,0.306419706597659,0.114620246631789,0.0975056463354052,0.0198546659105759	0.0454545454545455,0.2,0.166666666666667,0.136363636363636,0.25,0.192307692307692,0.409090909090909	diploid,diploid,diploid,diploid,diploid,diploid,diploid	0.1496855	0.1999833	0.485067	FALSE	TRUE	FALSE	FALSE	FALSE	ref_filtered	0	TRUE	FALSE

Mutation Counts

Variant Type	n matched via gene TAD	n matched via GeneHancer	n affecting ChIPSeq	total
SVs	3	3	3	3
CNAs	4	4	4	4
somatic SNVs/InDels	0	0	0	0
relevant somatic SNVs/InDels	0	0	-	-
all Mutations	7	7	-	7

SVs

sv_break1_chrom	sv_break1_pos	sv_break2_chrom	sv_break2_pos	sv_type	eventInversion
chr8	128917349	chr8	83753280	TRA	NORMAL
chr8	83753280	chr8	128917470	DUP	NORMAL
chr8	84387387	chr8	128863716	DUP	NORMAL

CNAs

cna_chrom	cna_start	cna_end	copy_number	CNA_type	log2
chr8	128863717	128917349	13.53935	DUP	NA
chr8	128917350	128917470	11.77908	DUP	NA
chr8	128917471	128920052	11.77908	DUP	NA
chr8	128783131	128863716	13.86030	DUP	NA

ICGC_MB94SVs/CNAs

IGV

General

sample_id	subgroup	FPKM	n_markers	n_ASE_markers	n_cnv_markers	p_all	delta_abs_all	copynumber_tag_all	combined_p_value	mean_delta_abs	ABH	ASE_marker_run_overlap	passed_FPKM_filter	passed_ASE_filter	ASE_filter_rescued_oncogene	passed_mean_delta_abs_filter	OHE_used_reference	OHE_used_pvalue	passed_OHE_filter	cis_activated_gene
ICGC_MB94	group_4	0.22	0	0	0				NA	NA	NA	FALSE	FALSE	NA	FALSE	NA	ref_filtered	0.0128064	TRUE	FALSE

Mutation Counts

Variant Type	n matched via gene TAD	n matched via GeneHancer	n affecting ChIPSeq	total
SVs	3	3	1	3
CNAs	4	4	1	4
somatic SNVs/InDels	0	0	0	0
relevant somatic SNVs/InDels	0	0	-	-
all Mutations	7	7	-	7

SVs

sv_break1_chrom	sv_break1_pos	sv_break2_chrom	sv_break2_pos	sv_type	eventInversion
chr8	129543393	chr8	130189976	DUP	NORMAL
chr8	128537648	chr8	129128203	DEL	NORMAL
chr8	130189794	chr8	129543393	TRA	NORMAL

CNAs

cna_chrom	cna_start	cna_end	copy_number	CNA_type	log2
chr8	129128204	129543393	6.180893	DUP	NA
chr8	129543394	129549927	6.729944	DUP	NA
chr8	129549927	130007927	6.951473	DUP	NA
chr8	128537649	129128203	4.745327	DUP	NA

PVT1 show/hide By gene

GeneHancer show/hide

GH08J127793 - (chr8:128805646-128810447)

SVs

CNAs

somatic SNVs

GH08J127799 - (chr8:128811309-128816439)

SVs

CNAs

GH08J127806 - (chr8:128818800-128825280)

SVs

CNAs

somatic SNVs

GH08J127813 - (chr8:128825576-128827390)

SVs

CNAs

GH08J127816 - (chr8:128828323-128833598)

SVs

CNAs

somatic SNVs

GH08J127826 - (chr8:128838247-128841045)

SVs

CNAs

GH08J127838 - (chr8:128851648-128853445)

SVs

CNAs

somatic SNVs

GH08J127850 - (chr8:128862299-128869350)

SVs

CNAs

GH08J127863 - (chr8:128875489-128885666)

SVs

CNAs

somatic SNVs

GH08J127874 - (chr8:128886941-128892557)

SVs

CNAs

somatic SNVs

GH08J127881 - (chr8:128894153-128894806)

SVs

CNAs

GH08J127882 - (chr8:128895047-128895246)

SVs

CNAs

GH08J127888 - (chr8:128900605-128905498)

SVs

CNAs

GH08J127915 - (chr8:128927898-128933813)

SVs

CNAs

somatic SNVs

GH08J127923 - (chr8:128935511-128936592)

SVs

CNAs

GH08J127924 - (chr8:128937031-128944862)

SVs

CNAs

GH08J127934 - (chr8:128946047-128946246)

SVs

CNAs

GH08J127936 - (chr8:128946847-128952446)

SVs

CNAs

somatic SNVs

GH08J127940 - (chr8:128953081-128953230)

SVs

CNAs

GH08J127941 - (chr8:128954247-128954647)

SVs

CNAs

GH08J127943 - (chr8:128955788-128958905)

SVs

CNAs

GH08J127947 - (chr8:128960048-128965612)

SVs

CNAs

GH08J127955 - (chr8:128968047-128969046)

SVs

CNAs

GH08J127966 - (chr8:128978473-128985063)

PVT1 By gene

GeneHancer

ChIP-Seq